l3mbtl1b (Gasterosteus aculeatus)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01530 (zf-C2HC) IPR002515 ENSGACG00000009206 T159015_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000012154 C2HC ZF 553 582

Links

Other C2HC ZF family TFs
Other Gasterosteus aculeatus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PK07402.1 Cannabis sativa PK07402.1 D 0.000
Q8H769_WHEAT Triticum aestivum Q8H769_WHEAT D 0.000
Q1ESI9_MAIZE Zea mays Q1ESI9_MAIZE D 0.000
DREB2G Arabidopsis thaliana AT5G18450 D 0.000
DREB2A Arabidopsis thaliana AT5G05410 D 0.000
DREB2D Arabidopsis thaliana AT1G75490 D 0.000
PK08602.1 Cannabis sativa PK08602.1 D 0.000
Bostr.13129s0423 Boechera stricta Bostr.13129s0423 I 0.000
Aquca_030_00214 Aquilegia coerulea Aquca_030_00214 I 0.000
Aquca_013_00679 Aquilegia coerulea Aquca_013_00679 I 0.000
Aquca_009_00282 Aquilegia coerulea Aquca_009_00282 I 0.000
mgf024545m Mimulus guttatus mgf024545m I 0.000
mgf017629m Mimulus guttatus mgf017629m I 0.000
Cucsa.342750 Cucumis sativus Cucsa.342750 I 0.000
mgf007881m Mimulus guttatus mgf007881m I 0.000
gw1.120.55.1 Physcomitrella patens gw1.120.55.1 I 0.000
e_gw1.292.36.1 Physcomitrella patens e_gw1.292.36.1 I 0.000
Bostr.19424s1037 Boechera stricta Bostr.19424s1037 I 0.000
Bostr.26527s0367 Boechera stricta Bostr.26527s0367 I 0.000
Eucgr.K02952 Eucalyptus grandis Eucgr.K02952 I 0.000
Eucgr.G03094 Eucalyptus grandis Eucgr.G03094 I 0.000
Ciclev10032029m.g Citrus clementina Ciclev10032029m.g I 0.000
Ciclev10005549m.g Citrus clementina Ciclev10005549m.g I 0.000
Ciclev10002280m.g Citrus clementina Ciclev10002280m.g I 0.000
Carubv10020960m.g Capsella rubella Carubv10020960m.g I 0.000
Carubv10013771m.g Capsella rubella Carubv10013771m.g I 0.000
Carubv10001099m.g Capsella rubella Carubv10001099m.g I 0.000
Cagra.1655s0066 Capsella grandiflora Cagra.1655s0066 I 0.000
Cagra.1504s0045 Capsella grandiflora Cagra.1504s0045 I 0.000
Cagra.0799s0022 Capsella grandiflora Cagra.0799s0022 I 0.000
Bostr.3288s0201 Boechera stricta Bostr.3288s0201 I 0.000
Cucsa.136780 Cucumis sativus Cucsa.136780 I 0.000
Cucsa.119440 Cucumis sativus Cucsa.119440 I 0.000
Cla012194 Citrullus lanatus Cla012194 I 0.000
Cla006713 Citrullus lanatus Cla006713 I 0.000
Cla001755 Citrullus lanatus Cla001755 I 0.000
Ca_12446 Cicer arietinum Ca_12446 I 0.000
Ca_10770 Cicer arietinum Ca_10770 I 0.000
Ca_07264 Cicer arietinum Ca_07264 I 0.000
VIT_18s0001g13320 Vitis vinifera VIT_18s0001g13320 I 0.000
VIT_13s0067g01960 Vitis vinifera VIT_13s0067g01960 I 0.000
TRIUR3_17409 Triticum urartu TRIUR3_17409 I 0.000
VIT_08s0007g08150 Vitis vinifera VIT_08s0007g08150 I 0.000
Cla021113 Citrullus lanatus Cla021113 I 0.000
Pm003634 Prunus mume Pm003634 I 0.000
Pm006274 Prunus mume Pm006274 I 0.000
cassava45031.m1 Manihot esculenta cassava45031.m1 I 0.000
cassava41240.m1 Manihot esculenta cassava41240.m1 I 0.000
cassava39243.m1 Manihot esculenta cassava39243.m1 I 0.000
cassava19475.valid.m1 Manihot esculenta cassava19475.valid.m1 I 0.000
cassava15495.m1 Manihot esculenta cassava15495.m1 I 0.000
30170.m014115 Ricinus communis 30170.m014115 I 0.000
29729.m002292 Ricinus communis 29729.m002292 I 0.000
27810.m000639 Ricinus communis 27810.m000639 I 0.000
Pm018989 Prunus mume Pm018989 I 0.000
Pm015262 Prunus mume Pm015262 I 0.000
TRIUR3_17973 Triticum urartu TRIUR3_17973 I 0.000
PDK_20s1493381g003 Phoenix dactylifera PDK_20s1493381g003 I 0.000
SapurV1A.0018s0040 Salix purpurea SapurV1A.0018s0040 I 0.000
SapurV1A.0001s0300 Salix purpurea SapurV1A.0001s0300 I 0.000
Pavir.J37967 Panicum virgatum Pavir.J37967 I 0.000
Pavir.Ib00517 Panicum virgatum Pavir.Ib00517 I 0.000
Pavir.Ia04341 Panicum virgatum Pavir.Ia04341 I 0.000
Pavir.Ea00429 Panicum virgatum Pavir.Ea00429 I 0.000
Pavir.Cb01298 Panicum virgatum Pavir.Cb01298 I 0.000
Pavir.Ca01725 Panicum virgatum Pavir.Ca01725 I 0.000
orange1.1g042353m.g Citrus sinensis orange1.1g042353m.g I 0.000
orange1.1g036655m.g Citrus sinensis orange1.1g036655m.g I 0.000
orange1.1g019546m.g Citrus sinensis orange1.1g019546m.g I 0.000
SapurV1A.0133s0330 Salix purpurea SapurV1A.0133s0330 I 0.000
SapurV1A.0188s0060 Salix purpurea SapurV1A.0188s0060 I 0.000
LjSGA_063888.1 Lotus japonicus LjSGA_063888.1 I 0.000
PK07829.1 Cannabis sativa PK07829.1 I 0.000
Thhalv10021161m.g Eutrema salsugineum Thhalv10021161m.g I 0.000
Thhalv10019142m.g Eutrema salsugineum Thhalv10019142m.g I 0.000
Thhalv10016913m.g Eutrema salsugineum Thhalv10016913m.g I 0.000
Thhalv10015907m.g Eutrema salsugineum Thhalv10015907m.g I 0.000
SapurV1A.2268s0010 Salix purpurea SapurV1A.2268s0010 I 0.000
SapurV1A.1420s0050 Salix purpurea SapurV1A.1420s0050 I 0.000
SapurV1A.1286s0030 Salix purpurea SapurV1A.1286s0030 I 0.000
SapurV1A.0673s0120 Salix purpurea SapurV1A.0673s0120 I 0.000
SapurV1A.0620s0100 Salix purpurea SapurV1A.0620s0100 I 0.000
MDP0000880312 Malus domestica MDP0000880312 I 0.000
MDP0000446783 Malus domestica MDP0000446783 I 0.000
Gorai.009G271400 Gossypium raimondii Gorai.009G271400 I 0.000
Gorai.009G197800 Gossypium raimondii Gorai.009G197800 I 0.000
Gorai.007G271900 Gossypium raimondii Gorai.007G271900 I 0.000
Gorai.005G110100 Gossypium raimondii Gorai.005G110100 I 0.000
gene26463-v1.0-hybrid Fragaria vesca gene26463-v1.0-hybrid I 0.000
gene21047-v1.0-hybrid Fragaria vesca gene21047-v1.0-hybrid I 0.000
gene16710-v1.0-hybrid Fragaria vesca gene16710-v1.0-hybrid I 0.000
gene08479-v1.0-hybrid Fragaria vesca gene08479-v1.0-hybrid I 0.000
gene01985-v1.0-hybrid Fragaria vesca gene01985-v1.0-hybrid I 0.000
evm.TU.supercontig_99.20 Carica papaya evm.TU.supercontig_99.20 I 0.000
evm.TU.supercontig_92.16 Carica papaya evm.TU.supercontig_92.16 I 0.000
Lus10011319.g Linum usitatissimum Lus10011319.g I 0.000
Lus10012210.g Linum usitatissimum Lus10012210.g I 0.000
MDP0000295902 Malus domestica MDP0000295902 I 0.000
MDP0000290585 Malus domestica MDP0000290585 I 0.000
MDP0000250927 Malus domestica MDP0000250927 I 0.000
MDP0000250924 Malus domestica MDP0000250924 I 0.000
MDP0000165880 Malus domestica MDP0000165880 I 0.000
MDP0000153866 Malus domestica MDP0000153866 I 0.000
MDP0000147009 Malus domestica MDP0000147009 I 0.000
MDP0000141335 Malus domestica MDP0000141335 I 0.000
Lus10034902.g Linum usitatissimum Lus10034902.g I 0.000
Lus10023633.g Linum usitatissimum Lus10023633.g I 0.000
Lus10012226.g Linum usitatissimum Lus10012226.g I 0.000
evm.TU.supercontig_19.121 Carica papaya evm.TU.supercontig_19.121 I 0.000
Traes_5BL_7F0FD1538 Triticum aestivum Traes_5BL_7F0FD1538 I 0.000
MTR_7g092190 Medicago truncatula MTR_7g092190 I 0.000
GRMZM2G156737 Zea mays GRMZM2G156737 I 0.000
GRMZM2G006745 Zea mays GRMZM2G006745 I 0.000
GLYMA19G32380 Glycine max GLYMA19G32380 I 0.000
GLYMA17G37350 Glycine max GLYMA17G37350 I 0.000
GLYMA14G07620 Glycine max GLYMA14G07620 I 0.000
GLYMA14G06080 Glycine max GLYMA14G06080 I 0.000
GLYMA10G21850 Glycine max GLYMA10G21850 I 0.000
GLYMA06G45680 Glycine max GLYMA06G45680 I 0.000
GLYMA06G03110 Glycine max GLYMA06G03110 I 0.000
GLYMA04G03070 Glycine max GLYMA04G03070 I 0.000
GLYMA03G29530 Glycine max GLYMA03G29530 I 0.000
GRMZM2G399098 Zea mays GRMZM2G399098 I 0.000
GRMZM2G419901 Zea mays GRMZM2G419901 I 0.000
MTR_5g083330 Medicago truncatula MTR_5g083330 I 0.000
MTR_1g023170 Medicago truncatula MTR_1g023170 I 0.000
MLOC_66686 Hordeum vulgare MLOC_66686 I 0.000
LPERR03G04860 Leersia perrieri LPERR03G04860 I 0.000
LPERR01G03760 Leersia perrieri LPERR01G03760 I 0.000
GSMUA_AchrUn_randomG14580_001 Musa acuminata GSMUA_AchrUn_randomG14580_001 I 0.000
GSMUA_AchrUn_randomG08690_001 Musa acuminata GSMUA_AchrUn_randomG08690_001 I 0.000
GSMUA_Achr9G04630_001 Musa acuminata GSMUA_Achr9G04630_001 I 0.000
GSMUA_Achr6G32780_001 Musa acuminata GSMUA_Achr6G32780_001 I 0.000
GSMUA_Achr5G28050_001 Musa acuminata GSMUA_Achr5G28050_001 I 0.000
GSMUA_Achr11G24820_001 Musa acuminata GSMUA_Achr11G24820_001 I 0.000
GLYMA02G42960 Glycine max GLYMA02G42960 I 0.000
GLYMA02G31350 Glycine max GLYMA02G31350 I 0.000
Bo9g177130 Brassica oleracea Bo9g177130 I 0.000
Bo9g155940 Brassica oleracea Bo9g155940 I 0.000
Bo6g119660 Brassica oleracea Bo6g119660 I 0.000
Bo6g086320 Brassica oleracea Bo6g086320 I 0.000
Bo4g190040 Brassica oleracea Bo4g190040 I 0.000
Bo2g083920 Brassica oleracea Bo2g083920 I 0.000
Bo2g006960 Brassica oleracea Bo2g006960 I 0.000
BGIOSGA011963 Oryza indica BGIOSGA011963 I 0.000
BGIOSGA002846 Oryza indica BGIOSGA002846 I 0.000
AMTR_s00039p00088760 Amborella trichopoda AMTR_s00039p00088760 I 0.000
AMTR_s00023p00044590 Amborella trichopoda AMTR_s00023p00044590 I 0.000
Bra002159 Brassica rapa Bra002159 I 0.000
Bra003752 Brassica rapa Bra003752 I 0.000
DREB2A Arabidopsis lyrata fgenesh2_kg.6__469__AT5G05410.1 I 0.000
fgenesh2_kg.2__1828__AT1G75490.1 Arabidopsis lyrata fgenesh2_kg.2__1828__AT1G75490.1 I 0.000
F775_32062 Aegilops tauschii F775_32062 I 0.000
F775_05774 Aegilops tauschii F775_05774 I 0.000
BRADI2G29960 Brachypodium distachyon BRADI2G29960 I 0.000
BRADI2G04000 Brachypodium distachyon BRADI2G04000 I 0.000
BRADI1G72990 Brachypodium distachyon BRADI1G72990 I 0.000
Bra028759 Brassica rapa Bra028759 I 0.000
Bra017011 Brassica rapa Bra017011 I 0.000
Bra015840 Brassica rapa Bra015840 I 0.000
Bra008200 Brassica rapa Bra008200 I 0.000
AMTR_s00022p00250320 Amborella trichopoda AMTR_s00022p00250320 I 0.000
Traes_4AS_0D75149B5 Triticum aestivum Traes_4AS_0D75149B5 I 0.000
SELMODRAFT_38483 Selaginella moellendorffii SELMODRAFT_38483 I 0.000
SELMODRAFT_27203 Selaginella moellendorffii SELMODRAFT_27203 I 0.000
scaffold_601912.1 Arabidopsis lyrata scaffold_601912.1 I 0.000
DREB2C Arabidopsis lyrata scaffold_402826.1 I 0.000
Sb09g016150 Sorghum bicolor Sb09g016150 I 0.000
Sb03g004980 Sorghum bicolor Sb03g004980 I 0.000
PRUPE_ppa026176mg Prunus persica PRUPE_ppa026176mg I 0.000
PRUPE_ppa023248mg Prunus persica PRUPE_ppa023248mg I 0.000
PRUPE_ppa022996mg Prunus persica PRUPE_ppa022996mg I 0.000
PRUPE_ppa022733mg Prunus persica PRUPE_ppa022733mg I 0.000
PRUPE_ppa007606mg Prunus persica PRUPE_ppa007606mg I 0.000
Si002067m.g Setaria italica Si002067m.g I 0.000
Si022619m.g Setaria italica Si022619m.g I 0.000
TRAES3BF064700080CFD_g Triticum aestivum TRAES3BF064700080CFD_g I 0.000
Traes_3AS_62742A0471 Triticum aestivum Traes_3AS_62742A0471 I 0.000
Traes_1BL_BDF0801D01 Triticum aestivum Traes_1BL_BDF0801D01 I 0.000
Traes_1AL_A9FB6BF52 Triticum aestivum Traes_1AL_A9FB6BF52 I 0.000
TCM_043306 Theobroma cacao TCM_043306 I 0.000
TCM_043302 Theobroma cacao TCM_043302 I 0.000
TCM_043275 Theobroma cacao TCM_043275 I 0.000
TCM_034132 Theobroma cacao TCM_034132 I 0.000
TCM_024756 Theobroma cacao TCM_024756 I 0.000
Solyc05g052410.1 Solanum lycopersicum Solyc05g052410.1 I 0.000
Solyc04g050750.1 Solanum lycopersicum Solyc04g050750.1 I 0.000
POPTR_0016s13380 Populus trichocarpa POPTR_0016s13380 I 0.000
POPTR_0016s05360 Populus trichocarpa POPTR_0016s05360 I 0.000
OPUNC03G05230 Oryza punctata OPUNC03G05230 I 0.000
OPUNC01G03970 Oryza punctata OPUNC01G03970 I 0.000
ONIVA03G05350 Oryza nivara ONIVA03G05350 I 0.000
ONIVA01G04630 Oryza nivara ONIVA01G04630 I 0.000
OMERI03G05220 Oryza meridionalis OMERI03G05220 I 0.000
OMERI01G04110 Oryza meridionalis OMERI01G04110 I 0.000
OLONG_014228 Oryza longistaminata OLONG_014228 I 0.000
OGLUM03G05490 Oryza glumaepatula OGLUM03G05490 I 0.000
OGLUM01G04560 Oryza glumaepatula OGLUM01G04560 I 0.000
OBART03G05550 Oryza barthii OBART03G05550 I 0.000
OBART01G04210 Oryza barthii OBART01G04210 I 0.000
ORGLA01G0037700 Oryza glaberrima ORGLA01G0037700 I 0.000
ORUFI01G04360 Oryza rufipogon ORUFI01G04360 I 0.000
POPTR_0010s19100 Populus trichocarpa POPTR_0010s19100 I 0.000
POPTR_0008s07360 Populus trichocarpa POPTR_0008s07360 I 0.000
POPTR_0006s10510 Populus trichocarpa POPTR_0006s10510 I 0.000
POPTR_0005s25470 Populus trichocarpa POPTR_0005s25470 I 0.000
POPTR_0002s03090 Populus trichocarpa POPTR_0002s03090 I 0.000
PGSC0003DMG400028700 Solanum tuberosum PGSC0003DMG400028700 I 0.000
PGSC0003DMG400027117 Solanum tuberosum PGSC0003DMG400027117 I 0.000
PGSC0003DMG400023717 Solanum tuberosum PGSC0003DMG400023717 I 0.000
DREB2E Oryza sativa OS03G0174400 I 0.000
DREB2A Oryza sativa OS01G0165000 I 0.000
ORUFI03G05330 Oryza rufipogon ORUFI03G05330 I 0.000
OB01G13930 Oryza brachyantha OB01G13930 I 0.000