CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ztf-11
(
Caenorhabditis elegans
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01530 (zf-C2HC)
IPR002515
WBGene00009939
T159400_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M00650_2.00
C2HC ZF
53
80
ACPTPGCDGSGHQTGLYTHHRSLSGCPR
M00650_2.00
C2HC ZF
99
127
RCTTAGCSGKGHVNGNRTSHRSLSGCPIA
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
F52F12.6a
C2HC ZF
264
291
ACPTPGCDGSGHQTGLYTHHRSLSGCPR
F52F12.6a
C2HC ZF
310
338
RCTTAGCSGKGHVNGNRTSHRSLSGCPIA
F52F12.6b
C2HC ZF
167
194
ACPTPGCDGSGHQTGLYTHHRSLSGCPR
F52F12.6b
C2HC ZF
213
241
RCTTAGCSGKGHVNGNRTSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Caenorhabditis elegans
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy