CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Alligator_sinensis_CCG014285.1
(
Alligator sinensis
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
Alligator_sinensis_CCG014285.1
T159419_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Alligator_sinensis_CCG014285.1
C2HC ZF
621
643
ACPTLGCKSIPHTKGSKYSFHHR
Alligator_sinensis_CCG014285.1
C2HC ZF
644
672
KCPTPGCDGSGHVTGRFTAHYCLSGCPLA
Links
Other
C2HC ZF
family TFs
Other
Alligator sinensis
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Brh_R012356
Buceros rhinoceros
Brh_R012356
N
0.961
Aan_R003320
Calypte anna
Aan_R003320
N
0.961
Afo_R009911
Aptenodytes forsteri
Afo_R009911
N
0.941
L3MBTL1
Meleagris gallopavo
ENSMGAG00000000827
N
0.941
ENSGALG00000000983
Gallus gallus
ENSGALG00000000983
N
0.941
Tal_R013237
Tyto alba
Tal_R013237
N
0.941
ENSTGUG00000003474
Taeniopygia guttata
ENSTGUG00000003474
N
0.922
ENSAPLG00000014035
Anas platyrhynchos
ENSAPLG00000014035
N
0.922
Gfo_R014039
Geospiza fortis
Gfo_R014039
N
0.922
ENSFALG00000012779
Ficedula albicollis
ENSFALG00000012779
N
0.922
L3MBTL1
Loxodonta africana
ENSLAFG00000012575
N
0.843
ENSLACG00000003590
Latimeria chalumnae
ENSLACG00000003590
N
0.824
Pvit_07756
Pogona vitticeps
Pvit_07756
N
0.804
ENSTBEG00000014200
Tupaia belangeri
ENSTBEG00000014200
N
0.784
L3MBTL1
Cavia porcellus
ENSCPOG00000008941
N
0.784
BGLB002717
Biomphalaria glabrata
BGLB002717
N
0.745
CGI_10026935
Crassostrea gigas
CGI_10026935
N
0.706
SMAR015290
Strigamia maritima
SMAR015290
N
0.706