CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cmyd_10014184
(
Chelonia mydas
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
Cmyd_10014184
T159431_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.789
0.789
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cmyd_10014184
C2HC ZF
325
352
KCPTPGCDGTGHVTGLYPHHRSLSGCPH
Cmyd_10014184
C2HC ZF
369
397
KCPTPGCTGRGHVNSNRNSHRSLSGCPIA
Links
Other
C2HC ZF
family TFs
Other
Chelonia mydas
TFs
66 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy