CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh2_pg.C_1230027
(
Branchiostoma floridae
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
estExt_fgenesh2_pg.C_1230027
T159485_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh2_pg.C_1230027
C2HC ZF
738
766
SCPTPGCDGLGHISGKYAKHRSTYGCPLA
estExt_fgenesh2_pg.C_1230027
C2HC ZF
1329
1357
TCPTPGCDGSGHVSGNYASHRSLSGCPRA
estExt_fgenesh2_pg.C_1230027
C2HC ZF
1370
1398
KCPTPGCDGSGHATGNYSSHRSLSGCPRA
estExt_fgenesh2_pg.C_1230027
C2HC ZF
1418
1446
RCPVPGCDGSGHVSGKYVTHRSASGCPLA
estExt_fgenesh2_pg.C_1230027
C2HC ZF
1497
1525
VCPTPGCDGSGHANGSFLTHRSASGCPLA
estExt_fgenesh2_pg.C_1230027
C2HC ZF
1576
1604
VCPTPGCDGSGHANGSFLTHRSLSGCPRA
Links
Other
C2HC ZF
family TFs
Other
Branchiostoma floridae
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy