CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HHAL001110-PA
(
Halyomorpha halys
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
HHAL001110-PA
T159510_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ztf-11
M00650_2.00
Caenorhabditis elegans
VAAGTTTN
NAAACTTB
PBM
Narasimhan et al.(2015)
pTH9925
0.707
0.707
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HHAL001110-PA
C2HC ZF
36
64
KCPTPGCDGSGHVTGNYSSHRSLSGCPRA
HHAL001110-PA
C2HC ZF
81
109
RCPIPGCDGSGHATGKFLSHRSASGCPIA
Links
Other
C2HC ZF
family TFs
Other
Halyomorpha halys
TFs
75 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy