GPLIN_001349600 (Globodera pallida)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 GPLIN_001349600 T159632_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001349600 C2HC ZF 115 142

Links

Other C2HC ZF family TFs
Other Globodera pallida TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GPLIN_000814800 Globodera pallida GPLIN_000814800 N 0.964
HPBE_0001834901 Heligmosomoides bakeri HPBE_0001834901 N 0.857
EEL_0000200601 Elaeophora elaphi EEL_0000200601 N 0.857
L892_g7301 Steinernema scapterisci L892_g7301 N 0.857
L898_g12863 Steinernema monticolum L898_g12863 N 0.857
nOo.2.0.1.g09682 Onchocerca ochengi nOo.2.0.1.g09682 N 0.857
nAv.1.0.1.g04361 Acanthocheilonema viteae nAv.1.0.1.g04361 N 0.857
maker-nMf.1.1.scaf02509-snap-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf02509-snap-gene-0.6 N 0.857
WUBG_11438 Wuchereria bancrofti WUBG_11438 N 0.857
ANCDUO_13707 Ancylostoma duodenale ANCDUO_13707 N 0.857
Bm4268 Brugia malayi Bm4268 N 0.857
CGI_10022678 Crassostrea gigas CGI_10022678 N 0.750
TsM_000155300 Taenia solium TsM_000155300 N 0.750
AMEM007577 Anopheles merus AMEM007577 N 0.724
SVUK_0001589601 Strongylus vulgaris SVUK_0001589601 N 0.714
MYT1L Macaca mulatta ENSMMUG00000009310 I 0.714
Ocbimv22011176m.g Octopus bimaculoides Ocbimv22011176m.g N 0.714
MESCA002178 Megaselia scalaris MESCA002178 N 0.714
PPAI004584 Phlebotomus papatasi PPAI004584 N 0.714
MYT1L Homo sapiens ENSG00000186487 I 0.714