L898_g12863 (Steinernema monticolum)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 L898_g12863 T159647_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
L898_g12863.t1 C2HC ZF 184 211

Links

Other C2HC ZF family TFs
Other Steinernema monticolum TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_00954 Aegilops tauschii F775_00954 I 0.000
F775_28392 Aegilops tauschii F775_28392 I 0.000
F775_23034 Aegilops tauschii F775_23034 I 0.000
F775_14392 Aegilops tauschii F775_14392 I 0.000
F775_14942 Aegilops tauschii F775_14942 I 0.000
AMTR_s00068p00099460 Amborella trichopoda AMTR_s00068p00099460 I 0.000
AMTR_s00068p00097220 Amborella trichopoda AMTR_s00068p00097220 I 0.000
AMTR_s00068p00092800 Amborella trichopoda AMTR_s00068p00092800 I 0.000
AMTR_s00024p00250970 Amborella trichopoda AMTR_s00024p00250970 I 0.000
BRADI1G32720 Brachypodium distachyon BRADI1G32720 I 0.000
BRADI2G53010 Brachypodium distachyon BRADI2G53010 I 0.000
Bo8g104300 Brassica oleracea Bo8g104300 I 0.000
PK14784.1 Cannabis sativa PK14784.1 I 0.000
Cagra.3373s0030 Capsella grandiflora Cagra.3373s0030 I 0.000
Carubv10018382m.g Capsella rubella Carubv10018382m.g I 0.000
evm.TU.supercontig_12.292 Carica papaya evm.TU.supercontig_12.292 I 0.000
evm.TU.supercontig_119.55 Carica papaya evm.TU.supercontig_119.55 I 0.000
Ca_17627 Cicer arietinum Ca_17627 I 0.000
Ca_11832 Cicer arietinum Ca_11832 I 0.000
Ciclev10013466m.g Citrus clementina Ciclev10013466m.g I 0.000
Ciclev10015648m.g Citrus clementina Ciclev10015648m.g I 0.000
Ciclev10021571m.g Citrus clementina Ciclev10021571m.g I 0.000
orange1.1g040726m.g Citrus sinensis orange1.1g040726m.g I 0.000
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.000
orange1.1g040841m.g Citrus sinensis orange1.1g040841m.g I 0.000
orange1.1g047854m.g Citrus sinensis orange1.1g047854m.g I 0.000
Eucgr.D02390 Eucalyptus grandis Eucgr.D02390 I 0.000
Eucgr.B03606 Eucalyptus grandis Eucgr.B03606 I 0.000
Eucgr.A02110 Eucalyptus grandis Eucgr.A02110 I 0.000
gene18691-v1.0-hybrid Fragaria vesca gene18691-v1.0-hybrid I 0.000
Gorai.004G150800 Gossypium raimondii Gorai.004G150800 I 0.000
Gorai.007G260600 Gossypium raimondii Gorai.007G260600 I 0.000
Gorai.007G350500 Gossypium raimondii Gorai.007G350500 I 0.000
Gorai.008G126700 Gossypium raimondii Gorai.008G126700 I 0.000
Gam1 Hordeum vulgare Q96464_HORVU D 0.000
MLOC_6041 Hordeum vulgare MLOC_6041 I 0.000
LPERR06G20610 Leersia perrieri LPERR06G20610 I 0.000
MDP0000791870 Malus domestica MDP0000791870 I 0.000
MDP0000147309 Malus domestica MDP0000147309 I 0.000
MDP0000655330 Malus domestica MDP0000655330 I 0.000
MDP0000915330 Malus domestica MDP0000915330 I 0.000
MDP0000723614 Malus domestica MDP0000723614 I 0.000
MDP0000574942 Malus domestica MDP0000574942 I 0.000
cassava9274.m1 Manihot esculenta cassava9274.m1 I 0.000
cassava6348.valid.m1 Manihot esculenta cassava6348.valid.m1 I 0.000
mgf019173m Mimulus guttatus mgf019173m I 0.000
mgf001865m Mimulus guttatus mgf001865m I 0.000
mgf010934m Mimulus guttatus mgf010934m I 0.000
GSMUA_Achr10G14030_001 Musa acuminata GSMUA_Achr10G14030_001 I 0.000
GSMUA_Achr4G23690_001 Musa acuminata GSMUA_Achr4G23690_001 I 0.000
GSMUA_Achr6G14840_001 Musa acuminata GSMUA_Achr6G14840_001 I 0.000
GSMUA_Achr7G00280_001 Musa acuminata GSMUA_Achr7G00280_001 I 0.000
GSMUA_Achr7G13700_001 Musa acuminata GSMUA_Achr7G13700_001 I 0.000
GSMUA_Achr5G06530_001 Musa acuminata GSMUA_Achr5G06530_001 I 0.000
OBART03G24120 Oryza barthii OBART03G24120 I 0.000
OB03G32840 Oryza brachyantha OB03G32840 I 0.000
ORGLA03G0224700 Oryza glaberrima ORGLA03G0224700 I 0.000
OGLUM03G24880 Oryza glumaepatula OGLUM03G24880 I 0.000
OGLUM06G26120 Oryza glumaepatula OGLUM06G26120 I 0.000
BGIOSGA020673 Oryza indica BGIOSGA020673 I 0.000
OLONG_025057 Oryza longistaminata OLONG_025057 I 0.000
OMERI03G21920 Oryza meridionalis OMERI03G21920 I 0.000
OMERI06G24960 Oryza meridionalis OMERI06G24960 I 0.000
ONIVA04G15310 Oryza nivara ONIVA04G15310 I 0.000
ONIVA06G28020 Oryza nivara ONIVA06G28020 I 0.000
OPUNC03G22220 Oryza punctata OPUNC03G22220 I 0.000
OPUNC06G22490 Oryza punctata OPUNC06G22490 I 0.000
ORUFI03G24730 Oryza rufipogon ORUFI03G24730 I 0.000
ORUFI06G26670 Oryza rufipogon ORUFI06G26670 I 0.000
OS03G0578900 Oryza sativa OS03G0578900 I 0.000
OS06G0679400 Oryza sativa OS06G0679400 I 0.000
Pavir.Da00077 Panicum virgatum Pavir.Da00077 I 0.000
Pavir.Ab00447 Panicum virgatum Pavir.Ab00447 I 0.000
Pavir.Ea03206 Panicum virgatum Pavir.Ea03206 I 0.000
Pavir.Ib03827 Panicum virgatum Pavir.Ib03827 I 0.000
Pavir.J31180 Panicum virgatum Pavir.J31180 I 0.000
Pavir.Db00593 Panicum virgatum Pavir.Db00593 I 0.000
POPTR_0013s05300 Populus trichocarpa POPTR_0013s05300 I 0.000
POPTR_0019s05210 Populus trichocarpa POPTR_0019s05210 I 0.000
POPTR_0003s21120 Populus trichocarpa POPTR_0003s21120 I 0.000
Pm018338 Prunus mume Pm018338 I 0.000
PRUPE_ppa006730mg Prunus persica PRUPE_ppa006730mg I 0.000
PRUPE_ppa009439mg Prunus persica PRUPE_ppa009439mg I 0.000
SapurV1A.0553s0100 Salix purpurea SapurV1A.0553s0100 I 0.000
SapurV1A.1276s0050 Salix purpurea SapurV1A.1276s0050 I 0.000
SapurV1A.0598s0010 Salix purpurea SapurV1A.0598s0010 I 0.000
SapurV1A.0553s0110 Salix purpurea SapurV1A.0553s0110 I 0.000
SapurV1A.0081s0400 Salix purpurea SapurV1A.0081s0400 I 0.000
SELMODRAFT_98669 Selaginella moellendorffii SELMODRAFT_98669 I 0.000
SELMODRAFT_127220 Selaginella moellendorffii SELMODRAFT_127220 I 0.000
Si004316m.g Setaria italica Si004316m.g I 0.000
Si006555m.g Setaria italica Si006555m.g I 0.000
Si039629m.g Setaria italica Si039629m.g I 0.000
Solyc01g005660.1 Solanum lycopersicum Solyc01g005660.1 I 0.000
Sb01g015920 Sorghum bicolor Sb01g015920 I 0.000
Sb10g027280 Sorghum bicolor Sb10g027280 I 0.000
TCM_024180 Theobroma cacao TCM_024180 I 0.000
TCM_025910 Theobroma cacao TCM_025910 I 0.000
Traes_7DL_FAF2AE9FB Triticum aestivum Traes_7DL_FAF2AE9FB I 0.000
Traes_7AL_0AD4A7A87 Triticum aestivum Traes_7AL_0AD4A7A87 I 0.000
Traes_6DS_A0EC5D808 Triticum aestivum Traes_6DS_A0EC5D808 I 0.000
Traes_4DL_4EE7DFCCD Triticum aestivum Traes_4DL_4EE7DFCCD I 0.000
Traes_4AL_9BF07972C Triticum aestivum Traes_4AL_9BF07972C I 0.000
TRAES3BF027700010CFD_g Triticum aestivum TRAES3BF027700010CFD_g I 0.000
TRIUR3_27104 Triticum urartu TRIUR3_27104 I 0.000
TRIUR3_22706 Triticum urartu TRIUR3_22706 I 0.000
TRIUR3_20797 Triticum urartu TRIUR3_20797 I 0.000
TRIUR3_17146 Triticum urartu TRIUR3_17146 I 0.000
TRIUR3_17294 Triticum urartu TRIUR3_17294 I 0.000
MYB101 Vitis vinifera VIT_12s0059g00700 I 0.000
VIT_08s0007g07230 Vitis vinifera VIT_08s0007g07230 I 0.000
GRMZM2G044824 Zea mays GRMZM2G044824 I 0.000
AC217264.3_FG005 Zea mays AC217264.3_FG005 I 0.000
GRMZM2G102790 Zea mays GRMZM2G102790 I 0.000
GRMZM2G161512 Zea mays GRMZM2G161512 N 0.000
GRMZM2G343068 Zea mays GRMZM2G343068 N 0.000
GRMZM2G070523 Zea mays GRMZM2G070523 I 0.000