Bra031242 (Brassica rapa)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 Bra031242 T159818_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB

VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.714 0.714
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.714 0.714
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.714 0.714
NFYA
M10403_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.714 0.714
NFYA
M10404_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.714 0.714
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH

DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra031242.1-P CBF/NF-Y 160 215

Links

Other CBF/NF-Y family TFs
Other Brassica rapa TFs

682 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A1O1_02181 Capronia coronata A1O1_02181 I 0.000
A1O7_08064 Cladophialophora yegresii A1O7_08064 I 0.000
A1O9_08153 Exophiala aquamarina A1O9_08153 I 0.000
ACRE_084480 Acremonium chrysogenum ACRE_084480 I 0.000
BBA_00861 Beauveria bassiana BBA_00861 I 0.000
BBA_07341 Beauveria bassiana BBA_07341 N 0.000
Bcin10g03530 Botrytis cinerea Bcin10g03530 I 0.000
CCM_05638 Cordyceps militaris CCM_05638 I 0.000
CFIO01_10341 Colletotrichum fioriniae CFIO01_10341 I 0.000
CHGG_07320 Chaetomium globosum CHGG_07320 I 0.000
CIMG_03081 Coccidioides immitis CIMG_03081 I 0.000
CMQ_6218 Grosmannia clavigera CMQ_6218 I 0.000
Cob_10342 Colletotrichum orbiculare Cob_10342 I 0.000
CPC735_010610 Coccidioides posadasii CPC735_010610 I 0.000
CPUR_07356 Claviceps purpurea CPUR_07356 I 0.000
EV44_g3230 Erysiphe necator EV44_g3230 I 0.000
F503_07473 Ophiostoma piceae uamh F503_07473 I 0.000
fgenesh2_pg.C_scaffold_1000308 Neurospora discreta fgenesh2_pg.C_scaffold_1000308 I 0.000
G647_07030 Cladophialophora carrionii G647_07030 I 0.000
GGTG_10494 Gaeumannomyces graminis GGTG_10494 I 0.000
GMDG_03846 Pseudogymnoascus destructans GMDG_03846 N 0.000
GSTUM_00002996001 Tuber melanosporum GSTUM_00002996001 I 0.000
H101_06251 Trichophyton interdigitale H101_06251 I 0.000
H102_00463 Trichophyton rubrum H102_00463 I 0.000
H105_00452 Trichophyton soudanense H105_00452 I 0.000
HCBG_01324 Histoplasma capsulatum HCBG_01324 I 0.000
HMPREF1120_02532 Exophiala dermatitidis HMPREF1120_02532 I 0.000
HMPREF1624_00610 Sporothrix schenckii HMPREF1624_00610 I 0.000
M7I_6116 Glarea lozoyensis M7I_6116 I 0.000
MAJ_03096 Metarhizium majus MAJ_03096 I 0.000
MANI_006126 Metarhizium anisopliae MANI_006126 I 0.000
MAPG_09932 Magnaporthe poae MAPG_09932 I 0.000
MBM_00232 Marssonina brunnea MBM_00232 I 0.000
MBR_08762 Metarhizium brunneum MBR_08762 I 0.000
MCYG_00067 Arthroderma otae MCYG_00067 I 0.000
MCYG_00067 Microsporum canis MCYG_00067 I 0.000
MGG_11764 Magnaporthe oryzae MGG_11764 I 0.000
MGU_09012 Metarhizium guizhouense MGU_09012 I 0.000
MGYG_07139 Microsporum gypseum MGYG_07139 I 0.000
tah-3 Neurospora crassa NCU03686 D 0.000
NEUTE1DRAFT_93932 Neurospora tetrasperma NEUTE1DRAFT_93932 I 0.000
OIDMADRAFT_38504 Oidiodendron maius OIDMADRAFT_38504 I 0.000
PAAG_05307 Paracoccidioides sp lutzii PAAG_05307 I 0.000
PABG_06059 Paracoccidioides brasiliensis PABG_06059 I 0.000
PFICI_07802 Pestalotiopsis fici PFICI_07802 N 0.000
PV04_08584 Capronia semiimmersa PV04_08584 I 0.000
PV05_01128 Exophiala xenobiotica PV05_01128 I 0.000
PV07_01284 Cladophialophora immunda PV07_01284 I 0.000
S40285_00002 Stachybotrys chlorohalonata S40285_00002 I 0.000
S40288_05664 Stachybotrys chartarum S40288_05664 I 0.000
SBOR_2018 Sclerotinia borealis SBOR_2018 I 0.000
SEPMUDRAFT_123488 Sphaerulina musiva SEPMUDRAFT_123488 I 0.000
SMAC_02549 Sordaria macrospora SMAC_02549 I 0.000
SPBR_06805 Sporothrix brasiliensis SPBR_06805 I 0.000
SS1G_07003 Sclerotinia sclerotiorum SS1G_07003 I 0.000
TESG_03220 Trichophyton tonsurans TESG_03220 I 0.000
TRIATDRAFT_133633 Trichoderma atroviride TRIATDRAFT_133633 I 0.000
UREG_02875 Uncinocarpus reesii UREG_02875 I 0.000
UV8b_6280 Ustilaginoidea virens UV8b_6280 I 0.000
V499_08420 Pseudogymnoascus pannorum V499_08420 N 0.000
VDBG_09426 Verticillium alfalfae VDBG_09426 I 0.000
VDBG_09426 Verticillium albo atrum VDBG_09426 I 0.000
VHEMI02535 Torrubiella hemipterigena VHEMI02535 I 0.000
X797_003001 Metarhizium robertsii X797_003001 I 0.000