NFYA (Procavia capensis)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 ENSPCAG00000011508 T159941_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB

VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
1.000 1.000
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
1.000 1.000
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
1.000 1.000
NFYA
M10403_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
1.000 1.000
NFYA
M10404_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
1.000 1.000
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH

DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
1.000 1.000
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH

DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.732 0.732
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000010731 CBF/NF-Y 263 318

Links

Other CBF/NF-Y family TFs
Other Procavia capensis TFs

462 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ORUFI03G16510 Oryza rufipogon ORUFI03G16510 I 0.000
Traes_2AS_09457EDD8 Triticum aestivum Traes_2AS_09457EDD8 I 0.000
Traes_2BS_58AA829F4 Triticum aestivum Traes_2BS_58AA829F4 I 0.000
Traes_2BS_924D34AA1 Triticum aestivum Traes_2BS_924D34AA1 I 0.000
Traes_2BS_C116E5668 Triticum aestivum Traes_2BS_C116E5668 I 0.000
Traes_2DS_5DF921ABB Triticum aestivum Traes_2DS_5DF921ABB I 0.000
TRAES3BF108700110CFD_g Triticum aestivum TRAES3BF108700110CFD_g I 0.000
Traes_4AS_DBDA5E9C6 Triticum aestivum Traes_4AS_DBDA5E9C6 I 0.000
Traes_4DL_F0BE36C9D Triticum aestivum Traes_4DL_F0BE36C9D I 0.000
Traes_6AS_6F89CC969 Triticum aestivum Traes_6AS_6F89CC969 I 0.000
Traes_6DS_90A627C3F Triticum aestivum Traes_6DS_90A627C3F I 0.000
TRIUR3_29857 Triticum urartu TRIUR3_29857 I 0.000
VIT_06s0004g03080 Vitis vinifera VIT_06s0004g03080 I 0.000
VIT_08s0040g02110 Vitis vinifera VIT_08s0040g02110 I 0.000
Ca_02520 Cicer arietinum Ca_02520 I 0.000
Ca_12031 Cicer arietinum Ca_12031 I 0.000
Cla014135 Citrullus lanatus Cla014135 I 0.000
Cla019771 Citrullus lanatus Cla019771 I 0.000
TCM_041055 Theobroma cacao TCM_041055 I 0.000
Solyc10g006880.2 Solanum lycopersicum Solyc10g006880.2 I 0.000
ORUFI07G27590 Oryza rufipogon ORUFI07G27590 I 0.000
NAC68 Oryza sativa OS01G0816100 I 0.000
OS03G0327800 Oryza sativa OS03G0327800 I 0.000
PGSC0003DMG400017567 Solanum tuberosum PGSC0003DMG400017567 I 0.000
PGSC0003DMG400019293 Solanum tuberosum PGSC0003DMG400019293 I 0.000
PGSC0003DMG400025031 Solanum tuberosum PGSC0003DMG400025031 I 0.000
POPTR_0011s04650 Populus trichocarpa POPTR_0011s04650 I 0.000
PRUPE_ppa007577mg Prunus persica PRUPE_ppa007577mg I 0.000
Sb01g036560 Sorghum bicolor Sb01g036560 I 0.000
Sb02g043210 Sorghum bicolor Sb02g043210 I 0.000
Sb03g037940 Sorghum bicolor Sb03g037940 I 0.000
Sb09g020750 Sorghum bicolor Sb09g020750 I 0.000
SELMODRAFT_133982 Selaginella moellendorffii SELMODRAFT_133982 I 0.000
SELMODRAFT_47266 Selaginella moellendorffii SELMODRAFT_47266 I 0.000
Si022381m.g Setaria italica Si022381m.g I 0.000
Si030267m.g Setaria italica Si030267m.g I 0.000
Solyc07g063420.2 Solanum lycopersicum Solyc07g063420.2 I 0.000
Pm011604 Prunus mume Pm011604 I 0.000
30078.m002348 Ricinus communis 30078.m002348 I 0.000
cassava26728.m1 Manihot esculenta cassava26728.m1 I 0.000
gene04766-v1.0-hybrid Fragaria vesca gene04766-v1.0-hybrid I 0.000
Gorai.009G418700 Gossypium raimondii Gorai.009G418700 I 0.000
Lus10007410.g Linum usitatissimum Lus10007410.g I 0.000
Lus10036117.g Linum usitatissimum Lus10036117.g I 0.000
Pavir.Bb03737 Panicum virgatum Pavir.Bb03737 I 0.000
Pavir.Ea00837 Panicum virgatum Pavir.Ea00837 I 0.000
Pavir.Ea03233 Panicum virgatum Pavir.Ea03233 I 0.000
Pavir.Eb03542 Panicum virgatum Pavir.Eb03542 I 0.000
Pavir.J22666 Panicum virgatum Pavir.J22666 I 0.000
Pavir.J23256 Panicum virgatum Pavir.J23256 I 0.000
Pavir.J30396 Panicum virgatum Pavir.J30396 I 0.000
Pavir.J34979 Panicum virgatum Pavir.J34979 I 0.000
Thhalv10004786m.g Eutrema salsugineum Thhalv10004786m.g I 0.000
PK08629.1 Cannabis sativa PK08629.1 I 0.000
chr1.CM0033.600.nc Lotus japonicus chr1.CM0033.600.nc I 0.000
chr1.CM0104.240.nc Lotus japonicus chr1.CM0104.240.nc I 0.000
chr3.CM0111.130.nd Lotus japonicus chr3.CM0111.130.nd I 0.000
evm.TU.contig_33298 Carica papaya evm.TU.contig_33298 I 0.000
Eucgr.I00058 Eucalyptus grandis Eucgr.I00058 I 0.000
cassava3577.m1 Manihot esculenta cassava3577.m1 I 0.000
Cucsa.060600 Cucumis sativus Cucsa.060600 I 0.000
Cucsa.126450 Cucumis sativus Cucsa.126450 I 0.000
e_gw1.259.28.1 Physcomitrella patens e_gw1.259.28.1 I 0.000
mgf007362m Mimulus guttatus mgf007362m I 0.000
mgf016382m Mimulus guttatus mgf016382m I 0.000
Aquca_014_00941 Aquilegia coerulea Aquca_014_00941 I 0.000
Aquca_024_00081 Aquilegia coerulea Aquca_024_00081 I 0.000
Aquca_027_00052 Aquilegia coerulea Aquca_027_00052 I 0.000
Bostr.0568s0429 Boechera stricta Bostr.0568s0429 I 0.000
Bostr.13129s0073 Boechera stricta Bostr.13129s0073 I 0.000
Cagra.0248s0059 Capsella grandiflora Cagra.0248s0059 I 0.000
Carubv10026953m.g Capsella rubella Carubv10026953m.g I 0.000
Eucgr.B02485 Eucalyptus grandis Eucgr.B02485 I 0.000
Eucgr.D00665 Eucalyptus grandis Eucgr.D00665 I 0.000
Eucgr.F01091 Eucalyptus grandis Eucgr.F01091 I 0.000
Eucgr.I00056 Eucalyptus grandis Eucgr.I00056 I 0.000
LjSGA_036741.1 Lotus japonicus LjSGA_036741.1 I 0.000
ORUFI01G38320 Oryza rufipogon ORUFI01G38320 I 0.000
ANAC102 Arabidopsis lyrata Al_scaffold_0008_2913 I 0.000
GLYMA12G29360 Glycine max GLYMA12G29360 I 0.000
GLYMA12G21272 Glycine max GLYMA12G21272 I 0.000
GLYMA05G15533 Glycine max GLYMA05G15533 I 0.000
GLYMA03G33690 Glycine max GLYMA03G33690 I 0.000
F775_16000 Aegilops tauschii F775_16000 I 0.000
F775_14365 Aegilops tauschii F775_14365 I 0.000
F775_02328 Aegilops tauschii F775_02328 I 0.000
F775_02308 Aegilops tauschii F775_02308 I 0.000
GLYMA13G40251 Glycine max GLYMA13G40251 I 0.000
GLYMA15G07620 Glycine max GLYMA15G07620 I 0.000
GSMUA_Achr4G02380_001 Musa acuminata GSMUA_Achr4G02380_001 I 0.000
GSMUA_Achr3G18010_001 Musa acuminata GSMUA_Achr3G18010_001 I 0.000
GSMUA_Achr10G29200_001 Musa acuminata GSMUA_Achr10G29200_001 I 0.000
GRMZM2G430849 Zea mays GRMZM2G430849 I 0.000
GRMZM2G109627 Zea mays GRMZM2G109627 I 0.000
GRMZM2G068973 Zea mays GRMZM2G068973 I 0.000
GRMZM2G042494 Zea mays GRMZM2G042494 I 0.000
GLYMA19G36421 Glycine max GLYMA19G36421 I 0.000
BRADI2G53260 Brachypodium distachyon BRADI2G53260 I 0.000
BRADI2G24987 Brachypodium distachyon BRADI2G24987 I 0.000
Bo3g005100 Brassica oleracea Bo3g005100 I 0.000
Bo2g009250 Brassica oleracea Bo2g009250 I 0.000
Bo02109s010 Brassica oleracea Bo02109s010 I 0.000
BGIOSGA026407 Oryza indica BGIOSGA026407 I 0.000
BGIOSGA000598 Oryza indica BGIOSGA000598 I 0.000
ANAC102 Arabidopsis thaliana AT5G63790 I 0.000
NAC081 Arabidopsis thaliana AT5G08790 I 0.000
AMTR_s00119p00040230 Amborella trichopoda AMTR_s00119p00040230 I 0.000
Bo9g174170 Brassica oleracea Bo9g174170 I 0.000
Bra001597 Brassica rapa Bra001597 I 0.000
BRADI1G63600 Brachypodium distachyon BRADI1G63600 I 0.000
BRADI1G53770 Brachypodium distachyon BRADI1G53770 I 0.000
BRADI1G24390 Brachypodium distachyon BRADI1G24390 I 0.000
BRADI1G17480 Brachypodium distachyon BRADI1G17480 I 0.000
Bra038663 Brassica rapa Bra038663 I 0.000
Bra029201 Brassica rapa Bra029201 I 0.000
Bra028645 Brassica rapa Bra028645 I 0.000
Bra006015 Brassica rapa Bra006015 I 0.000
GSMUA_Achr6G32320_001 Musa acuminata GSMUA_Achr6G32320_001 I 0.000
GSMUA_Achr6G32330_001 Musa acuminata GSMUA_Achr6G32330_001 I 0.000
ORGLA07G0209600 Oryza glaberrima ORGLA07G0209600 I 0.000
OBART07G26600 Oryza barthii OBART07G26600 I 0.000
OGLUM01G39020 Oryza glumaepatula OGLUM01G39020 I 0.000
OGLUM03G16100 Oryza glumaepatula OGLUM03G16100 I 0.000
OGLUM07G26630 Oryza glumaepatula OGLUM07G26630 I 0.000
OGLUM07G26640 Oryza glumaepatula OGLUM07G26640 I 0.000
OLONG_005610 Oryza longistaminata OLONG_005610 I 0.000
OMERI01G32290 Oryza meridionalis OMERI01G32290 I 0.000
OMERI03G14270 Oryza meridionalis OMERI03G14270 I 0.000
OMERI07G23240 Oryza meridionalis OMERI07G23240 I 0.000
ONIVA01G39980 Oryza nivara ONIVA01G39980 I 0.000
ONIVA03G16920 Oryza nivara ONIVA03G16920 I 0.000
OPUNC01G34000 Oryza punctata OPUNC01G34000 I 0.000
OPUNC03G15460 Oryza punctata OPUNC03G15460 I 0.000
OPUNC07G07310 Oryza punctata OPUNC07G07310 I 0.000
OPUNC07G25060 Oryza punctata OPUNC07G25060 I 0.000
ORGLA01G0288400 Oryza glaberrima ORGLA01G0288400 I 0.000
ORGLA03G0152700 Oryza glaberrima ORGLA03G0152700 I 0.000
OBART03G15960 Oryza barthii OBART03G15960 I 0.000
OBART01G35010 Oryza barthii OBART01G35010 I 0.000
OLONG_012944 Oryza longistaminata OLONG_012944 I 0.000
MTR_2157s0010 Medicago truncatula MTR_2157s0010 I 0.000
MLOC_8116 Hordeum vulgare MLOC_8116 I 0.000
MLOC_65101 Hordeum vulgare MLOC_65101 I 0.000
MLOC_63743 Hordeum vulgare MLOC_63743 I 0.000
LPERR03G13950 Leersia perrieri LPERR03G13950 I 0.000
LPERR01G30200 Leersia perrieri LPERR01G30200 I 0.000
GSMUA_AchrUn_randomG17360_001 Musa acuminata GSMUA_AchrUn_randomG17360_001 I 0.000
GSMUA_Achr7G21780_001 Musa acuminata GSMUA_Achr7G21780_001 I 0.000
GSMUA_Achr7G21770_001 Musa acuminata GSMUA_Achr7G21770_001 I 0.000
OB03G25680 Oryza brachyantha OB03G25680 I 0.000
OB01G43840 Oryza brachyantha OB01G43840 I 0.000
MTR_7g100990 Medicago truncatula MTR_7g100990 I 0.000
MTR_2g093810 Medicago truncatula MTR_2g093810 I 0.000
Ciclev10030252m.g Citrus clementina Ciclev10030252m.g N 0.000
evm.TU.supercontig_435.1 Carica papaya evm.TU.supercontig_435.1 N 0.000
GLYMA10G09246 Glycine max GLYMA10G09246 N 0.000
PK06287.1 Cannabis sativa PK06287.1 N 0.000
30111.m000742 Ricinus communis 30111.m000742 N 0.000
POPTR_0006s13140 Populus trichocarpa POPTR_0006s13140 N 0.000
Si002386m.g Setaria italica Si002386m.g N 0.000
MLOC_70929 Hordeum vulgare MLOC_70929 N 0.000
PRUPE_ppa017586mg Prunus persica PRUPE_ppa017586mg N 0.000
TRAES3BF020100160CFD_g Triticum aestivum TRAES3BF020100160CFD_g N 0.000
Lus10023179.g Linum usitatissimum Lus10023179.g N 0.000
orange1.1g045934m.g Citrus sinensis orange1.1g045934m.g N 0.000
orange1.1g042614m.g Citrus sinensis orange1.1g042614m.g N 0.000
MDP0000255884 Malus domestica MDP0000255884 N 0.000
TRAES3BF094400050CFD_g Triticum aestivum TRAES3BF094400050CFD_g N 0.000