GRMZM2G000686 (Zea mays)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 GRMZM2G000686 T160032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.750 0.750
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.750 0.750
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.750 0.750
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.750 0.750
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.750 0.750
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G000686_P01 CBF/NF-Y 130 185
GRMZM2G000686_P02 CBF/NF-Y 130 185
GRMZM2G000686_P03 CBF/NF-Y 137 192
GRMZM2G000686_P04 CBF/NF-Y 142 197
GRMZM2G000686_P05 CBF/NF-Y 113 168
GRMZM2G000686_P06 CBF/NF-Y 118 173
GRMZM2G000686_P08 CBF/NF-Y 39 94
GRMZM2G000686_P10 CBF/NF-Y 137 192

Links

Other CBF/NF-Y family TFs
Other Zea mays TFs

Invalid Input OrderBy

628 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action