LPERR03G04900 (Leersia perrieri)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 LPERR03G04900 T160102_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB

VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.750 0.750
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.750 0.750
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV

BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.750 0.750
NFYA
M10403_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.750 0.750
NFYA
M10404_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.750 0.750
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH

DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.750 0.750
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LPERR03G04900.1 CBF/NF-Y 152 207
LPERR03G04900.2 CBF/NF-Y 168 223
LPERR03G04900.3 CBF/NF-Y 138 193
LPERR03G04900.4 CBF/NF-Y 126 181

Links

Other CBF/NF-Y family TFs
Other Leersia perrieri TFs

Invalid Input OrderBy

612 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action