CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART03G27560
(
Oryza barthii
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02045 (CBFB_NFYA)
IPR001289
OBART03G27560
T160194_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART03G27560.1
CBF/NF-Y
149
188
APIYVNAKQYEGILRRRRARAKAQRENRLVKGRKVRTPAS
Links
Other
CBF/NF-Y
family TFs
Other
Oryza barthii
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G165488
Zea mays
GRMZM2G165488
N
0.857
LPERR03G22840
Leersia perrieri
LPERR03G22840
N
0.850
GRMZM5G829103
Zea mays
GRMZM5G829103
N
0.825
OB03G35340
Oryza brachyantha
OB03G35340
N
0.825
TRIUR3_28596
Triticum urartu
TRIUR3_28596
N
0.800
Pavir.Ia01146
Panicum virgatum
Pavir.Ia01146
N
0.800
Traes_5DS_443F1993A
Triticum aestivum
Traes_5DS_443F1993A
N
0.800
Traes_5BS_F1DE20B4B
Triticum aestivum
Traes_5BS_F1DE20B4B
N
0.800
Si036465m.g
Setaria italica
Si036465m.g
N
0.800
Si022607m.g
Setaria italica
Si022607m.g
N
0.800
F775_09086
Aegilops tauschii
F775_09086
N
0.800
Pavir.Ib04124
Panicum virgatum
Pavir.Ib04124
N
0.800
BRADI1G13680
Brachypodium distachyon
BRADI1G13680
N
0.800
LPERR12G16030
Leersia perrieri
LPERR12G16030
N
0.800
Traes_5AS_378F353CF
Triticum aestivum
Traes_5AS_378F353CF
N
0.800
MLOC_76757
Hordeum vulgare
MLOC_76757
N
0.775
OB12G25960
Oryza brachyantha
OB12G25960
N
0.775
BRADI4G01380
Brachypodium distachyon
BRADI4G01380
N
0.775
Sb08g021910
Sorghum bicolor
Sb08g021910
N
0.750
OMERI12G13600
Oryza meridionalis
OMERI12G13600
N
0.725
OLONG_002491
Oryza longistaminata
OLONG_002491
N
0.725
BGIOSGA035818
Oryza indica
BGIOSGA035818
N
0.700
OPUNC12G17240
Oryza punctata
OPUNC12G17240
N
0.700
ORUFI12G21270
Oryza rufipogon
ORUFI12G21270
N
0.700
OS12G0618600
Oryza sativa
OS12G0618600
N
0.700