PGSC0003DMG400028144 (Solanum tuberosum)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 PGSC0003DMG400028144 T160310_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400072322 CBF/NF-Y 51 105
PGSC0003DMT400072323 CBF/NF-Y 31 85
PGSC0003DMT400072324 CBF/NF-Y 12 66

Links

Other CBF/NF-Y family TFs
Other Solanum tuberosum TFs

83 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Lus10016411.g Linum usitatissimum Lus10016411.g I 0.709
TCM_024732 Theobroma cacao TCM_024732 I 0.714
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.709
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.709
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I 0.714
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.709
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I 0.714
Lus10019708.g Linum usitatissimum Lus10019708.g I 0.709
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I 0.714
Cla015490 Citrullus lanatus Cla015490 I 0.709
MDP0000183865 Malus domestica MDP0000183865 I 0.727
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.709
PK21261.1 Cannabis sativa PK21261.1 I 0.714
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.709
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.709
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.709
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N 0.709
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.709
Cagra.20869s0002 Capsella grandiflora Cagra.20869s0002 N 0.727
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N 0.709
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.709
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.709
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.745
mgf025421m Mimulus guttatus mgf025421m N 0.714
mg014677m Mimulus guttatus mg014677m N 0.745
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.727
Bostr.7128s0065 Boechera stricta Bostr.7128s0065 N 0.727
Carubv10009883m.g Capsella rubella Carubv10009883m.g N 0.727
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.709
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N 0.714
Thhalv10011685m.g Eutrema salsugineum Thhalv10011685m.g N 0.727
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N 0.714
MDP0000506954 Malus domestica MDP0000506954 N 0.727
MDP0000279028 Malus domestica MDP0000279028 N 0.714
MDP0000223651 Malus domestica MDP0000223651 N 0.727
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.727
Eucgr.K01943 Eucalyptus grandis Eucgr.K01943 N 0.714
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.709
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.727
gene28941-v1.0-hybrid Fragaria vesca gene28941-v1.0-hybrid N 0.714
evm.TU.supercontig_25.96 Carica papaya evm.TU.supercontig_25.96 N 0.709
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N 0.709
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N 0.714
Carubv10014289m.g Capsella rubella Carubv10014289m.g N 0.709
PK17701.1 Cannabis sativa PK17701.1 N 0.709
cassava24161.valid.m1 Manihot esculenta cassava24161.valid.m1 N 0.714
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N 0.709
PGSC0003DMG401021124 Solanum tuberosum PGSC0003DMG401021124 N 0.732
PGSC0003DMG400021365 Solanum tuberosum PGSC0003DMG400021365 N 0.855
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N 0.732
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.709
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.709
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.709
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.727
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.709
F775_09086 Aegilops tauschii F775_09086 N 0.709
Bra037968 Brassica rapa Bra037968 N 0.727
Bra014368 Brassica rapa Bra014368 N 0.709
Bo6g050970 Brassica oleracea Bo6g050970 N 0.709
Bo3g184530 Brassica oleracea Bo3g184530 N 0.709
NFYA9 Arabidopsis thaliana AT3G20910 N 0.709
NFYA5 Arabidopsis thaliana AT1G54160 N 0.727
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N 0.714
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N 0.714
29333.m001059 Ricinus communis 29333.m001059 N 0.709
Pm027028 Prunus mume Pm027028 N 0.727
Pm016266 Prunus mume Pm016266 N 0.714
Pm010516 Prunus mume Pm010516 N 0.709
Cla009990 Citrullus lanatus Cla009990 N 0.727
Ca_20250 Cicer arietinum Ca_20250 N 0.709
Ca_07995 Cicer arietinum Ca_07995 N 0.709
VIT_11s0016g01480 Vitis vinifera VIT_11s0016g01480 N 0.714
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.709
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.709
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.709
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.709
TCM_026909 Theobroma cacao TCM_026909 N 0.732
Solyc10g081840.1 Solanum lycopersicum Solyc10g081840.1 N 0.927
Solyc02g069860.2 Solanum lycopersicum Solyc02g069860.2 N 0.750
Solyc01g006930.2 Solanum lycopersicum Solyc01g006930.2 N 0.855
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N 0.709
NFYA5 Arabidopsis lyrata Al_scaffold_0001_4860 N 0.727