POPTR_0016s06860 (Populus trichocarpa)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 POPTR_0016s06860 T160342_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s06860.1 CBF/NF-Y 155 210
POPTR_0016s06860.2 CBF/NF-Y 132 187
POPTR_0016s06860.3 CBF/NF-Y 155 210

Links

Other CBF/NF-Y family TFs
Other Populus trichocarpa TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000002077 Ailuropoda melanoleuca ENSAMEG00000002077 I 0.000
ENSAMEG00000016926 Ailuropoda melanoleuca ENSAMEG00000016926 I 0.000
THAP12 Anolis carolinensis ENSACAG00000017074 I 0.000
ENSAMXG00000002922 Astyanax mexicanus ENSAMXG00000002922 I 0.000
ENSP00000260045-D1 Bos grunniens ENSP00000260045-D1 I 0.000
THAP12 Bos taurus ENSBTAG00000031609 I 0.000
ENSCJAG00000012300 Callithrix jacchus ENSCJAG00000012300 I 0.000
Aan_R009109 Calypte anna Aan_R009109 I 0.000
THAP12 Canis familiaris ENSCAFG00000005274 I 0.000
THAP12 Cavia porcellus ENSCPOG00000013167 I 0.000
ENSCSAG00000003894 Chlorocebus sabaeus ENSCSAG00000003894 I 0.000
ENSCHOG00000009417 Choloepus hoffmanni ENSCHOG00000009417 I 0.000
prkrirb Danio rerio ENSDARG00000020964 D 0.000
ENSDNOG00000031781 Dasypus novemcinctus ENSDNOG00000031781 I 0.000
ENSDORG00000007522 Dipodomys ordii ENSDORG00000007522 I 0.000
ENSGMOG00000010245 Gadus morhua ENSGMOG00000010245 I 0.000
THAP12 Gallus gallus ENSGALG00000000838 D 0.000
prkrirb Gasterosteus aculeatus ENSGACG00000010435 I 0.000
ENSGGOG00000026052 Gorilla gorilla ENSGGOG00000026052 I 0.000
THAP12 Gorilla gorilla ENSGGOG00000024317 I 0.000
ENSGGOG00000023767 Gorilla gorilla ENSGGOG00000023767 I 0.000
THAP12 Homo sapiens ENSG00000137492 D 0.000
ENSLACG00000001033 Latimeria chalumnae ENSLACG00000001033 I 0.000
ENSLOCG00000004788 Lepisosteus oculatus ENSLOCG00000004788 I 0.000
THAP12 Loxodonta africana ENSLAFG00000011743 I 0.000
ENSP00000260045 Macaca fascicularis ENSP00000260045 I 0.000
ENSMMUP00000040972 Macaca fascicularis ENSMMUP00000040972 I 0.000
ENSMMUG00000022399 Macaca mulatta ENSMMUG00000022399 I 0.000
ENSMMUG00000013164 Macaca mulatta ENSMMUG00000013164 I 0.000
THAP12 Monodelphis domestica ENSMODG00000005315 I 0.000
Thap12 Mus musculus ENSMUSG00000030753 I 0.000
ENSMLUG00000001341 Myotis lucifugus ENSMLUG00000001341 I 0.000
ENSMLUG00000000564 Myotis lucifugus ENSMLUG00000000564 I 0.000
ENSNLEG00000005175 Nomascus leucogenys ENSNLEG00000005175 I 0.000
ENSONIG00000011168 Oreochromis niloticus ENSONIG00000011168 I 0.000
THAP12 Ornithorhynchus anatinus ENSOANG00000000831 I 0.000
ENSOCUG00000009178 Oryctolagus cuniculus ENSOCUG00000009178 I 0.000
ENSOCUG00000017323 Oryctolagus cuniculus ENSOCUG00000017323 I 0.000
ENSOCUG00000021566 Oryctolagus cuniculus ENSOCUG00000021566 I 0.000
prkrirb Oryzias latipes ENSORLG00000005427 D 0.000
THAP12 Otolemur garnettii ENSOGAG00000001569 I 0.000
ENSPANG00000004011 Papio anubis ENSPANG00000004011 I 0.000
ENSPANG00000003101 Papio anubis ENSPANG00000003101 I 0.000
ENSPFOG00000009414 Poecilia formosa ENSPFOG00000009414 I 0.000
ENSPPYG00000003697 Pongo abelii ENSPPYG00000003697 I 0.000
ENSPCAG00000008407 Procavia capensis ENSPCAG00000008407 I 0.000
ENSPVAG00000011935 Pteropus vampyrus ENSPVAG00000011935 I 0.000
prkrirb Takifugu rubripes ENSTRUG00000007070 I 0.000
prkrirb Tetraodon nigroviridis ENSTNIG00000003292 D 0.000
thap12 Xenopus tropicalis XB-GENE-6073216 I 0.000
ENSXMAG00000001706 Xiphophorus maculatus ENSXMAG00000001706 I 0.000