29333.m001059 (Ricinus communis)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 29333.m001059 T160559_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
29333.m001059 CBF/NF-Y 156 211

Links

Other CBF/NF-Y family TFs
Other Ricinus communis TFs

190 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
OGLUM03G30810 Oryza glumaepatula OGLUM03G30810 I 0.714
ONIVA03G31950 Oryza nivara ONIVA03G31950 I 0.714
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I 0.732
MDP0000183865 Malus domestica MDP0000183865 I 0.773
GLYMA13G27230 Glycine max GLYMA13G27230 I 0.732
GLYMA12G36540 Glycine max GLYMA12G36540 I 0.714
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I 0.732
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I 0.714
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I 0.732
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I 0.714
TCM_024732 Theobroma cacao TCM_024732 I 0.732
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.714
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.714
OBART03G30600 Oryza barthii OBART03G30600 I 0.714
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I 0.732
mgf012950m Mimulus guttatus mgf012950m I 0.714
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I 0.732
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.714
Gorai.004G172100 Gossypium raimondii Gorai.004G172100 I 0.714
OMERI03G26770 Oryza meridionalis OMERI03G26770 I 0.714
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.714
GSMUA_Achr4G11090_001 Musa acuminata GSMUA_Achr4G11090_001 I 0.732
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.714
TRIUR3_09920 Triticum urartu TRIUR3_09920 I 0.732
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I 0.732
PK11147.1 Cannabis sativa PK11147.1 I 0.714
BGIOSGA013378 Oryza indica BGIOSGA013378 I 0.714
OS03G0696300 Oryza sativa OS03G0696300 I 0.714
PK21261.1 Cannabis sativa PK21261.1 I 0.750
Cla015490 Citrullus lanatus Cla015490 I 0.732
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I 0.714
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I 0.732
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.714
ORUFI03G31840 Oryza rufipogon ORUFI03G31840 I 0.714
evm.TU.supercontig_125.6 Carica papaya evm.TU.supercontig_125.6 I 0.732
OB03G37700 Oryza brachyantha OB03G37700 I 0.714
OPUNC03G27900 Oryza punctata OPUNC03G27900 I 0.714
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I 0.732
ORGLA03G0280400 Oryza glaberrima ORGLA03G0280400 I 0.714
SapurV1A.0133s0410 Salix purpurea SapurV1A.0133s0410 I 0.714
Cucsa.374630 Cucumis sativus Cucsa.374630 I 0.714
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.732
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I 0.714
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.714
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N 0.714
Carubv10014086m.g Capsella rubella Carubv10014086m.g N 0.732
Carubv10001713m.g Capsella rubella Carubv10001713m.g N 0.774
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N 0.774
Cagra.3346s0024 Capsella grandiflora Cagra.3346s0024 N 0.714
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N 0.732
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.714
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N 0.714
Bostr.23794s0634 Boechera stricta Bostr.23794s0634 N 0.732
cassava24247.valid.m1 Manihot esculenta cassava24247.valid.m1 N 0.839
cassava31873.valid.m1 Manihot esculenta cassava31873.valid.m1 N 0.732
cassava31874.valid.m1 Manihot esculenta cassava31874.valid.m1 N 0.732
cassava41983.valid.m1 Manihot esculenta cassava41983.valid.m1 N 0.839
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.714
Cucsa.241980 Cucumis sativus Cucsa.241980 N 0.786
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N 0.804
mg014677m Mimulus guttatus mg014677m N 0.714
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N 0.714
mgf016940m Mimulus guttatus mgf016940m N 0.714
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.786
Aquca_076_00118 Aquilegia coerulea Aquca_076_00118 N 0.714
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N 0.792
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.714
mgf025421m Mimulus guttatus mgf025421m N 0.821
cassava24161.valid.m1 Manihot esculenta cassava24161.valid.m1 N 0.714
Carubv10014289m.g Capsella rubella Carubv10014289m.g N 0.714
MDP0000588222 Malus domestica MDP0000588222 N 0.786
MDP0000785523 Malus domestica MDP0000785523 N 0.786
MDP0000948645 Malus domestica MDP0000948645 N 0.804
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N 0.857
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N 0.714
Pavir.Ia01146 Panicum virgatum Pavir.Ia01146 N 0.732
Pavir.Ib04124 Panicum virgatum Pavir.Ib04124 N 0.732
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N 0.768
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N 0.768
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N 0.786
Thhalv10017261m.g Eutrema salsugineum Thhalv10017261m.g N 0.732
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N 0.750
PK00926.1 Cannabis sativa PK00926.1 N 0.732
PK20005.1 Cannabis sativa PK20005.1 N 0.714
PK26326.1 Cannabis sativa PK26326.1 N 0.750
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N 0.732
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N 0.786
MDP0000375005 Malus domestica MDP0000375005 N 0.804
MDP0000279028 Malus domestica MDP0000279028 N 0.714
MDP0000129029 Malus domestica MDP0000129029 N 0.786
Carubv10024092m.g Capsella rubella Carubv10024092m.g N 0.714
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N 0.857
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N 0.714
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N 0.714
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N 0.818
Eucgr.K01943 Eucalyptus grandis Eucgr.K01943 N 0.732
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N 0.821
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N 0.786
evm.TU.supercontig_20.45 Carica papaya evm.TU.supercontig_20.45 N 0.732
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N 0.804
gene28941-v1.0-hybrid Fragaria vesca gene28941-v1.0-hybrid N 0.714
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.768
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N 0.750
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N 0.714
Gorai.011G004400 Gossypium raimondii Gorai.011G004400 N 0.732
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.804
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.804
PDK_20s1414531g001 Phoenix dactylifera PDK_20s1414531g001 N 0.706
30075.m001182 Ricinus communis 30075.m001182 N 0.714
AMTR_s00004p00174960 Amborella trichopoda AMTR_s00004p00174960 N 0.732
GSMUA_Achr2G12930_001 Musa acuminata GSMUA_Achr2G12930_001 N 0.714
GRMZM5G829103 Zea mays GRMZM5G829103 N 0.750
GRMZM2G165488 Zea mays GRMZM2G165488 N 0.714
GLYMA19G38800 Glycine max GLYMA19G38800 N 0.750
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.714
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.786
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.714
GLYMA08G13090 Glycine max GLYMA08G13090 N 0.750
GSMUA_Achr3G29730_001 Musa acuminata GSMUA_Achr3G29730_001 N 0.732
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.714
OB12G25960 Oryza brachyantha OB12G25960 N 0.714
Al_scaffold_0481_2 Arabidopsis lyrata Al_scaffold_0481_2 N 0.732
OB03G35340 Oryza brachyantha OB03G35340 N 0.714
MTR_7g106450 Medicago truncatula MTR_7g106450 N 0.750
MTR_1g056530 Medicago truncatula MTR_1g056530 N 0.768
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.714
GSMUA_Achr4G31420_001 Musa acuminata GSMUA_Achr4G31420_001 N 0.714
GSMUA_Achr4G28390_001 Musa acuminata GSMUA_Achr4G28390_001 N 0.714
GLYMA05G29970 Glycine max GLYMA05G29970 N 0.714
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.750
Bo3g060160 Brassica oleracea Bo3g060160 N 0.750
Bo1g150420 Brassica oleracea Bo1g150420 N 0.750
BGIOSGA024793 Oryza indica BGIOSGA024793 N 0.714
NFYA10 Arabidopsis thaliana AT5G06510 N 0.792
NFYA9 Arabidopsis thaliana AT3G20910 N 0.714
UNE8 Arabidopsis thaliana AT3G05690 N 0.714
NFYA4 Arabidopsis thaliana AT2G34720 N 0.732
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N 0.714
Bo4g039370 Brassica oleracea Bo4g039370 N 0.714
Bo5g145140 Brassica oleracea Bo5g145140 N 0.750
fgenesh2_kg.4__1496__AT2G34720.1 Arabidopsis lyrata fgenesh2_kg.4__1496__AT2G34720.1 N 0.732
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N 0.714
F775_09086 Aegilops tauschii F775_09086 N 0.714
Bra040529 Brassica rapa Bra040529 N 0.750
Bra009200 Brassica rapa Bra009200 N 0.732
Bra005397 Brassica rapa Bra005397 N 0.714
Bra001164 Brassica rapa Bra001164 N 0.732
Bo9g176100 Brassica oleracea Bo9g176100 N 0.732
OBART12G19060 Oryza barthii OBART12G19060 N 0.714
OGLUM07G02990 Oryza glumaepatula OGLUM07G02990 N 0.714
OGLUM12G20730 Oryza glumaepatula OGLUM12G20730 N 0.714
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.714
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.714
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.714
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.714
TCM_026909 Theobroma cacao TCM_026909 N 0.714
TCM_022984 Theobroma cacao TCM_022984 N 0.786
Solyc10g081840.1 Solanum lycopersicum Solyc10g081840.1 N 0.709
Solyc01g006930.2 Solanum lycopersicum Solyc01g006930.2 N 0.764
GLYMA02G35190 Glycine max GLYMA02G35190 N 0.786
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.839
Cla017884 Citrullus lanatus Cla017884 N 0.786
Cla017115 Citrullus lanatus Cla017115 N 0.714
Cla009990 Citrullus lanatus Cla009990 N 0.714
Cla000845 Citrullus lanatus Cla000845 N 0.732
Ca_20250 Cicer arietinum Ca_20250 N 0.714
Ca_14455 Cicer arietinum Ca_14455 N 0.768
Ca_00866 Cicer arietinum Ca_00866 N 0.786
VIT_10s0003g04650 Vitis vinifera VIT_10s0003g04650 N 0.714
Si036465m.g Setaria italica Si036465m.g N 0.732
Si022607m.g Setaria italica Si022607m.g N 0.714
OS07G0158500 Oryza sativa OS07G0158500 N 0.714
ORGLA12G0163500 Oryza glaberrima ORGLA12G0163500 N 0.714
ORGLA07G0030900 Oryza glaberrima ORGLA07G0030900 N 0.714
OPUNC07G03530 Oryza punctata OPUNC07G03530 N 0.714
ONIVA12G18060 Oryza nivara ONIVA12G18060 N 0.714
ONIVA07G02150 Oryza nivara ONIVA07G02150 N 0.714
OMERI12G13600 Oryza meridionalis OMERI12G13600 N 0.714
OMERI07G18960 Oryza meridionalis OMERI07G18960 N 0.714
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N 0.714
PGSC0003DMG400021365 Solanum tuberosum PGSC0003DMG400021365 N 0.764
SELMODRAFT_438143 Selaginella moellendorffii SELMODRAFT_438143 N 0.732
SELMODRAFT_38090 Selaginella moellendorffii SELMODRAFT_38090 N 0.732
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N 0.792
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N 0.714
Sb01g013430 Sorghum bicolor Sb01g013430 N 0.732
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N 0.804
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N 0.821
PGSC0003DMG400028144 Solanum tuberosum PGSC0003DMG400028144 N 0.709
Pm026038 Prunus mume Pm026038 N 0.804