CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Sakowv30001860m.g
(
Saccoglossus kowalevskii
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
Sakowv30001860m.g
T160617_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NFYA
M08104_2.00
Homo sapiens
NSTGATTGGYB
VRCCAATCASN
ChIP-seq
Mathelier et al.(2014)
MA0060.3
0.911
0.911
NFYA
M09018_2.00
Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A
0.911
0.911
Nfya
M09019_2.00
Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR
Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A
0.911
0.911
NFYA
M10403_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_02
0.911
0.911
NFYA
M10404_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NFYA_Q5
0.911
0.911
NFYA
M10405_2.00
Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN
Transfac
Matys et al.(2006)
V$NFY_C
0.911
0.911
HAP2
M08452_2.00
Saccharomyces cerevisiae
TTGGH
DCCAA
COMPILED
Mathelier et al.(2014)
MA0313.1
0.750
0.750
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
23918825_peptide
CBF/NF-Y
244
299
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918826_peptide
CBF/NF-Y
244
299
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918827_peptide
CBF/NF-Y
243
298
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918828_peptide
CBF/NF-Y
241
296
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918829_peptide
CBF/NF-Y
241
296
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918830_peptide
CBF/NF-Y
240
295
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918831_peptide
CBF/NF-Y
240
295
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
23918832_peptide
CBF/NF-Y
192
247
EPLYVNAKQYHRILKRRQARAKLEAEGKIPKERKKYLHESRHKHAMNRVRGDGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Saccoglossus kowalevskii
TFs
683 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy