CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.10399s0005
(
Capsella grandiflora
)
CBF/NF-Y
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02045 (CBFB_NFYA)
IPR001289
Cagra.10399s0005
T160635_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.10399s0005.1.p
CBF/NF-Y
162
217
EPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF
Cagra.10399s0005.2.p
CBF/NF-Y
161
216
EPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF
Cagra.10399s0005.3.p
CBF/NF-Y
157
212
EPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF
Cagra.10399s0005.4.p
CBF/NF-Y
156
211
EPVFVNAKQYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRF
Links
Other
CBF/NF-Y
family TFs
Other
Capsella grandiflora
TFs
516 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy