orange1.1g021081m.g (Citrus sinensis)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 orange1.1g021081m.g T160728_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g021081m CBF/NF-Y 151 206

Links

Other CBF/NF-Y family TFs
Other Citrus sinensis TFs

223 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N 1.000
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N 0.929
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.911
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N 0.911
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N 0.893
TCM_022984 Theobroma cacao TCM_022984 N 0.893
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N 0.875
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N 0.875
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N 0.875
GLYMA02G35190 Glycine max GLYMA02G35190 N 0.857
Lus10021259.g Linum usitatissimum Lus10021259.g N 0.857
Lus10013592.g Linum usitatissimum Lus10013592.g N 0.857
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.857
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N 0.857
MDP0000948645 Malus domestica MDP0000948645 N 0.857
MDP0000375005 Malus domestica MDP0000375005 N 0.857
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N 0.857
GLYMA03G36140 Glycine max GLYMA03G36140 N 0.857
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N 0.857
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N 0.857
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N 0.857
Pm026038 Prunus mume Pm026038 N 0.857
29333.m001059 Ricinus communis 29333.m001059 N 0.857
Ca_00866 Cicer arietinum Ca_00866 N 0.857
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N 0.849
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N 0.849
NFYA10 Arabidopsis thaliana AT5G06510 N 0.849
Carubv10001713m.g Capsella rubella Carubv10001713m.g N 0.849
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N 0.849
MDP0000588222 Malus domestica MDP0000588222 N 0.839
GLYMA19G38800 Glycine max GLYMA19G38800 N 0.839
MDP0000785523 Malus domestica MDP0000785523 N 0.839
Cucsa.241980 Cucumis sativus Cucsa.241980 N 0.839
MTR_1g056530 Medicago truncatula MTR_1g056530 N 0.839
Cla017884 Citrullus lanatus Cla017884 N 0.839
Ca_14455 Cicer arietinum Ca_14455 N 0.839
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N 0.839
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N 0.839
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N 0.839
MDP0000129029 Malus domestica MDP0000129029 N 0.839
cassava41983.valid.m1 Manihot esculenta cassava41983.valid.m1 N 0.821
MTR_7g106450 Medicago truncatula MTR_7g106450 N 0.821
Bo9g176100 Brassica oleracea Bo9g176100 N 0.821
MDP0000183865 Malus domestica MDP0000183865 I 0.818
cassava24247.valid.m1 Manihot esculenta cassava24247.valid.m1 N 0.804
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N 0.804
Bo5g145140 Brassica oleracea Bo5g145140 N 0.804
Carubv10014086m.g Capsella rubella Carubv10014086m.g N 0.804
Bra009200 Brassica rapa Bra009200 N 0.804
PK26326.1 Cannabis sativa PK26326.1 N 0.804
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N 0.804
Cucsa.374630 Cucumis sativus Cucsa.374630 I 0.786
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.786
Bo3g060160 Brassica oleracea Bo3g060160 N 0.786
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I 0.768
Gorai.002G151800 Gossypium raimondii Gorai.002G151800 I 0.768
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N 0.768
Bra040529 Brassica rapa Bra040529 N 0.768
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.768
TCM_024732 Theobroma cacao TCM_024732 I 0.768
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.768
Bra001164 Brassica rapa Bra001164 N 0.768
evm.TU.supercontig_125.6 Carica papaya evm.TU.supercontig_125.6 I 0.768
Gorai.003G093300 Gossypium raimondii Gorai.003G093300 I 0.768
Cla000845 Citrullus lanatus Cla000845 N 0.768
Bo1g150420 Brassica oleracea Bo1g150420 N 0.768
GSMUA_Achr4G11090_001 Musa acuminata GSMUA_Achr4G11090_001 I 0.768
GSMUA_Achr4G31420_001 Musa acuminata GSMUA_Achr4G31420_001 N 0.768
UNE8 Arabidopsis thaliana AT3G05690 N 0.768
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N 0.768
mgf025421m Mimulus guttatus mgf025421m N 0.768
AMTR_s00004p00174960 Amborella trichopoda AMTR_s00004p00174960 N 0.768
cassava38260.valid.m1 Manihot esculenta cassava38260.valid.m1 I 0.768
SapurV1A.0133s0410 Salix purpurea SapurV1A.0133s0410 I 0.768
PGSC0003DMG400021365 Solanum tuberosum PGSC0003DMG400021365 N 0.764
Solyc01g006930.2 Solanum lycopersicum Solyc01g006930.2 N 0.764
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.750
Eucgr.K01943 Eucalyptus grandis Eucgr.K01943 N 0.750
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.750
PK21261.1 Cannabis sativa PK21261.1 I 0.750
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.750
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.750
PK11147.1 Cannabis sativa PK11147.1 I 0.750
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I 0.750
TCM_005875 Theobroma cacao TCM_005875 I 0.750
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I 0.750
Cla015490 Citrullus lanatus Cla015490 I 0.750
GLYMA08G13090 Glycine max GLYMA08G13090 N 0.750
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N 0.750
MDP0000279028 Malus domestica MDP0000279028 N 0.750
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I 0.750
GSMUA_Achr3G29730_001 Musa acuminata GSMUA_Achr3G29730_001 N 0.750
GLYMA13G27230 Glycine max GLYMA13G27230 I 0.750
Gorai.004G172100 Gossypium raimondii Gorai.004G172100 I 0.750
AMTR_s00155p00071520 Amborella trichopoda AMTR_s00155p00071520 N 0.750
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.750
VIT_10s0003g04650 Vitis vinifera VIT_10s0003g04650 N 0.732
Cla017115 Citrullus lanatus Cla017115 N 0.732
evm.TU.supercontig_20.45 Carica papaya evm.TU.supercontig_20.45 N 0.732
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.732
TRIUR3_09920 Triticum urartu TRIUR3_09920 I 0.732
Cla009990 Citrullus lanatus Cla009990 N 0.732
BGIOSGA013378 Oryza indica BGIOSGA013378 I 0.732
Ca_20250 Cicer arietinum Ca_20250 N 0.732
mgf016940m Mimulus guttatus mgf016940m N 0.732
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.732
gene28941-v1.0-hybrid Fragaria vesca gene28941-v1.0-hybrid N 0.732
Pm016266 Prunus mume Pm016266 N 0.732
gene26819-v1.0-hybrid Fragaria vesca gene26819-v1.0-hybrid N 0.732
Si037045m.g Setaria italica Si037045m.g I 0.732
ONIVA03G31950 Oryza nivara ONIVA03G31950 I 0.732
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N 0.732
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N 0.732
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.732
GSMUA_Achr2G12930_001 Musa acuminata GSMUA_Achr2G12930_001 N 0.732
ORGLA03G0280400 Oryza glaberrima ORGLA03G0280400 I 0.732
GRMZM2G091964 Zea mays GRMZM2G091964 I 0.732
OPUNC03G27900 Oryza punctata OPUNC03G27900 I 0.732
OMERI03G26770 Oryza meridionalis OMERI03G26770 I 0.732
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I 0.732
OB03G37700 Oryza brachyantha OB03G37700 I 0.732
GSMUA_Achr4G31650_001 Musa acuminata GSMUA_Achr4G31650_001 N 0.732
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.732
OBART03G30600 Oryza barthii OBART03G30600 I 0.732
GSMUA_Achr4G28390_001 Musa acuminata GSMUA_Achr4G28390_001 N 0.732
Pavir.J08102 Panicum virgatum Pavir.J08102 I 0.732
Ciclev10032207m.g Citrus clementina Ciclev10032207m.g N 0.732
OGLUM03G30810 Oryza glumaepatula OGLUM03G30810 I 0.732
PK20005.1 Cannabis sativa PK20005.1 N 0.732
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.732
SELMODRAFT_438143 Selaginella moellendorffii SELMODRAFT_438143 N 0.732
SELMODRAFT_38090 Selaginella moellendorffii SELMODRAFT_38090 N 0.732
Sb01g011220 Sorghum bicolor Sb01g011220 I 0.732
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.732
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I 0.732
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N 0.732
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I 0.732
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I 0.732
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I 0.732
PK00926.1 Cannabis sativa PK00926.1 N 0.732
GLYMA12G36540 Glycine max GLYMA12G36540 I 0.732
OS03G0696300 Oryza sativa OS03G0696300 I 0.732
ORUFI03G31840 Oryza rufipogon ORUFI03G31840 I 0.732
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.732
PGSC0003DMG400011806 Solanum tuberosum PGSC0003DMG400011806 N 0.732
PRUPE_ppa012173mg Prunus persica PRUPE_ppa012173mg N 0.732
GLYMA05G29970 Glycine max GLYMA05G29970 N 0.732
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N 0.732
Eucgr.G03377 Eucalyptus grandis Eucgr.G03377 N 0.714
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N 0.714
MDP0000223651 Malus domestica MDP0000223651 N 0.714
SapurV1A.2739s0010 Salix purpurea SapurV1A.2739s0010 N 0.714
Thhalv10009032m.g Eutrema salsugineum Thhalv10009032m.g N 0.714
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N 0.714
PDK_20s1462571g003 Phoenix dactylifera PDK_20s1462571g003 N 0.714
SapurV1A.0027s0420 Salix purpurea SapurV1A.0027s0420 N 0.714
MDP0000682805 Malus domestica MDP0000682805 N 0.714
Gorai.009G115000 Gossypium raimondii Gorai.009G115000 N 0.714
Gorai.011G004400 Gossypium raimondii Gorai.011G004400 N 0.714
MDP0000278621 Malus domestica MDP0000278621 N 0.714
MDP0000506954 Malus domestica MDP0000506954 N 0.714
Eucgr.K01921 Eucalyptus grandis Eucgr.K01921 N 0.714
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.714
OMERI08G05500 Oryza meridionalis OMERI08G05500 N 0.714
OMERI12G13600 Oryza meridionalis OMERI12G13600 N 0.714
OMERI07G18960 Oryza meridionalis OMERI07G18960 N 0.714
OLONG_018144 Oryza longistaminata OLONG_018144 N 0.714
OGLUM08G05950 Oryza glumaepatula OGLUM08G05950 N 0.714
OGLUM12G20730 Oryza glumaepatula OGLUM12G20730 N 0.714
ONIVA07G02150 Oryza nivara ONIVA07G02150 N 0.714
ONIVA08G05590 Oryza nivara ONIVA08G05590 N 0.714
ORGLA08G0048400 Oryza glaberrima ORGLA08G0048400 N 0.714
ORGLA12G0163500 Oryza glaberrima ORGLA12G0163500 N 0.714
ORGLA07G0030900 Oryza glaberrima ORGLA07G0030900 N 0.714
OPUNC07G03530 Oryza punctata OPUNC07G03530 N 0.714
ONIVA12G18060 Oryza nivara ONIVA12G18060 N 0.714
OGLUM07G02990 Oryza glumaepatula OGLUM07G02990 N 0.714
OBART12G19060 Oryza barthii OBART12G19060 N 0.714
Bo5g063060 Brassica oleracea Bo5g063060 N 0.714
Bra032395 Brassica rapa Bra032395 N 0.714
BGIOSGA028138 Oryza indica BGIOSGA028138 N 0.714
BGIOSGA024793 Oryza indica BGIOSGA024793 N 0.714
NFYA1 Arabidopsis thaliana AT5G12840 N 0.714
F775_09086 Aegilops tauschii F775_09086 N 0.714
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N 0.714
OB12G25960 Oryza brachyantha OB12G25960 N 0.714
OBART08G05580 Oryza barthii OBART08G05580 N 0.714
MTR_8g037270 Medicago truncatula MTR_8g037270 N 0.714
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.714
LPERR08G05240 Leersia perrieri LPERR08G05240 N 0.714
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.714
ORUFI08G06250 Oryza rufipogon ORUFI08G06250 N 0.714
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I 0.714
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N 0.714
cassava31874.valid.m1 Manihot esculenta cassava31874.valid.m1 N 0.714
cassava31873.valid.m1 Manihot esculenta cassava31873.valid.m1 N 0.714
OS07G0158500 Oryza sativa OS07G0158500 N 0.714
cassava29667.valid.m1 Manihot esculenta cassava29667.valid.m1 I 0.714
mg014677m Mimulus guttatus mg014677m N 0.714
mgf012950m Mimulus guttatus mgf012950m I 0.714
Cagra.1535s0021 Capsella grandiflora Cagra.1535s0021 N 0.714
Carubv10001701m.g Capsella rubella Carubv10001701m.g N 0.714
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.714
Bostr.2902s0020 Boechera stricta Bostr.2902s0020 N 0.714
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.714
Pm027028 Prunus mume Pm027028 N 0.714
29912.m005288 Ricinus communis 29912.m005288 N 0.714
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N 0.714
Si022607m.g Setaria italica Si022607m.g N 0.714
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N 0.714
PGSC0003DMG400006863 Solanum tuberosum PGSC0003DMG400006863 I 0.714
OS08G0196700 Oryza sativa OS08G0196700 N 0.714
Pm010516 Prunus mume Pm010516 N 0.714
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I 0.714
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.714
HAP2A Arabidopsis lyrata Al_scaffold_0006_1178 N 0.714
Ca_07995 Cicer arietinum Ca_07995 N 0.714
TCM_026909 Theobroma cacao TCM_026909 N 0.714
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.714
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.714
Bra008878 Brassica rapa Bra008878 I 0.709
Bra006165 Brassica rapa Bra006165 N 0.709
Bo2g010950 Brassica oleracea Bo2g010950 N 0.709