LjSGA_058509.1 (Lotus japonicus)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02045 (CBFB_NFYA) IPR001289 LjSGA_058509.1 T160816_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
LjSGA_058509.1 CBF/NF-Y 1 42

Links

Other CBF/NF-Y family TFs
Other Lotus japonicus TFs

212 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
GLYMA17G05920 Glycine max GLYMA17G05920 I 0.976
GLYMA15G18970 Glycine max GLYMA15G18970 I 0.976
Ca_11593 Cicer arietinum Ca_11593 N 0.952
GLYMA09G07960 Glycine max GLYMA09G07960 I 0.952
Gorai.013G226200 Gossypium raimondii Gorai.013G226200 I 0.929
MDP0000827821 Malus domestica MDP0000827821 N 0.905
POPTR_0018s07220 Populus trichocarpa POPTR_0018s07220 N 0.905
Cla017115 Citrullus lanatus Cla017115 N 0.881
SapurV1A.1588s0020 Salix purpurea SapurV1A.1588s0020 N 0.881
Pm027028 Prunus mume Pm027028 N 0.881
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N 0.881
SapurV1A.0087s0010 Salix purpurea SapurV1A.0087s0010 N 0.881
cassava2701.m1 Manihot esculenta cassava2701.m1 N 0.857
Bra016031 Brassica rapa Bra016031 N 0.857
Bra008052 Brassica rapa Bra008052 N 0.857
Bra014368 Brassica rapa Bra014368 N 0.857
Bra021527 Brassica rapa Bra021527 N 0.857
fgenesh1_pg.C_scaffold_286000001 Arabidopsis lyrata fgenesh1_pg.C_scaffold_286000001 N 0.857
Thhalv10011685m.g Eutrema salsugineum Thhalv10011685m.g N 0.857
LPERR02G28390 Leersia perrieri LPERR02G28390 I 0.857
MDP0000223651 Malus domestica MDP0000223651 N 0.857
Bra003867 Brassica rapa Bra003867 N 0.857
MDP0000506954 Malus domestica MDP0000506954 N 0.857
GLYMA07G04050 Glycine max GLYMA07G04050 I 0.857
Gorai.010G086300 Gossypium raimondii Gorai.010G086300 N 0.857
Bra037968 Brassica rapa Bra037968 N 0.857
Cagra.1013s0019 Capsella grandiflora Cagra.1013s0019 N 0.857
Bo6g116250 Brassica oleracea Bo6g116250 N 0.857
Bo3g184530 Brassica oleracea Bo3g184530 N 0.857
AMTR_s00048p00192930 Amborella trichopoda AMTR_s00048p00192930 I 0.857
Al_scaffold_0003_1456 Arabidopsis lyrata Al_scaffold_0003_1456 N 0.857
Bo2g079060 Brassica oleracea Bo2g079060 N 0.857
Carubv10020596m.g Capsella rubella Carubv10020596m.g N 0.857
Bostr.10273s0069 Boechera stricta Bostr.10273s0069 N 0.857
Bo6g050970 Brassica oleracea Bo6g050970 N 0.857
Bo6g116240 Brassica oleracea Bo6g116240 N 0.857
Bo1g134650 Brassica oleracea Bo1g134650 N 0.857
Aquca_076_00118 Aquilegia coerulea Aquca_076_00118 N 0.857
Bostr.7128s0065 Boechera stricta Bostr.7128s0065 N 0.833
NFYA5 Arabidopsis thaliana AT1G54160 N 0.833
Cagra.20869s0002 Capsella grandiflora Cagra.20869s0002 N 0.833
Carubv10009883m.g Capsella rubella Carubv10009883m.g N 0.833
NFYA5 Arabidopsis lyrata Al_scaffold_0001_4860 N 0.833
estExt_fgenesh1_pg.C_420118 Physcomitrella patens estExt_fgenesh1_pg.C_420118 N 0.833
OB02G41320 Oryza brachyantha OB02G41320 I 0.833
Pavir.Ib01915 Panicum virgatum Pavir.Ib01915 I 0.833
MTR_2g099490 Medicago truncatula MTR_2g099490 N 0.833
GSMUA_AchrUn_randomG15140_001 Musa acuminata GSMUA_AchrUn_randomG15140_001 I 0.833
Ca_02713 Cicer arietinum Ca_02713 N 0.833
Gorai.012G010900 Gossypium raimondii Gorai.012G010900 N 0.833
HAP2C Arabidopsis thaliana AT1G72830 N 0.833
HAP2C Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001597 N 0.833
MDP0000183865 Malus domestica MDP0000183865 I 0.818
OBART02G34510 Oryza barthii OBART02G34510 I 0.810
OMERI02G32760 Oryza meridionalis OMERI02G32760 I 0.810
ONIVA02G36550 Oryza nivara ONIVA02G36550 I 0.810
Bostr.15697s0348 Boechera stricta Bostr.15697s0348 N 0.810
30075.m001182 Ricinus communis 30075.m001182 N 0.810
mg014677m Mimulus guttatus mg014677m N 0.810
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N 0.810
Eucgr.F03169 Eucalyptus grandis Eucgr.F03169 I 0.810
OPUNC02G31840 Oryza punctata OPUNC02G31840 I 0.810
ORGLA02G0298500 Oryza glaberrima ORGLA02G0298500 I 0.810
Carubv10010359m.g Capsella rubella Carubv10010359m.g N 0.810
Lus10038448.g Linum usitatissimum Lus10038448.g N 0.810
Cagra.1508s0155 Capsella grandiflora Cagra.1508s0155 N 0.810
Si036728m.g Setaria italica Si036728m.g I 0.810
Lus10023358.g Linum usitatissimum Lus10023358.g N 0.810
OS02G0776400 Oryza sativa OS02G0776400 I 0.810
evm.TU.supercontig_25.96 Carica papaya evm.TU.supercontig_25.96 N 0.810
MDP0000434309 Malus domestica MDP0000434309 N 0.810
OPUNC03G19990 Oryza punctata OPUNC03G19990 I 0.810
LPERR07G18840 Leersia perrieri LPERR07G18840 I 0.810
GSMUA_Achr8G16700_001 Musa acuminata GSMUA_Achr8G16700_001 N 0.810
GSMUA_Achr2G21730_001 Musa acuminata GSMUA_Achr2G21730_001 N 0.810
Bo4g039370 Brassica oleracea Bo4g039370 N 0.810
Bra005397 Brassica rapa Bra005397 N 0.810
PDK_20s1414021g001 Phoenix dactylifera PDK_20s1414021g001 N 0.810
Thhalv10017261m.g Eutrema salsugineum Thhalv10017261m.g N 0.786
GRMZM2G037630 Zea mays GRMZM2G037630 N 0.786
Si019645m.g Setaria italica Si019645m.g N 0.786
GRMZM5G857944 Zea mays GRMZM5G857944 N 0.786
Bo5g063060 Brassica oleracea Bo5g063060 N 0.786
Cucsa.127910 Cucumis sativus Cucsa.127910 I 0.786
Thhalv10009032m.g Eutrema salsugineum Thhalv10009032m.g N 0.786
Cucsa.048230 Cucumis sativus Cucsa.048230 N 0.786
SapurV1A.0083s0230 Salix purpurea SapurV1A.0083s0230 N 0.786
Cla009990 Citrullus lanatus Cla009990 N 0.786
PK17701.1 Cannabis sativa PK17701.1 N 0.786
Cla008690 Citrullus lanatus Cla008690 N 0.786
Cla015490 Citrullus lanatus Cla015490 I 0.786
Gorai.009G143800 Gossypium raimondii Gorai.009G143800 N 0.786
Bostr.23794s0634 Boechera stricta Bostr.23794s0634 N 0.786
Bra032395 Brassica rapa Bra032395 N 0.786
Pm010516 Prunus mume Pm010516 N 0.786
Cucsa.124180 Cucumis sativus Cucsa.124180 N 0.786
PRUPE_ppa011627mg Prunus persica PRUPE_ppa011627mg N 0.786
OLONG_003469 Oryza longistaminata OLONG_003469 N 0.786
GSMUA_Achr9G10300_001 Musa acuminata GSMUA_Achr9G10300_001 N 0.786
OMERI03G19370 Oryza meridionalis OMERI03G19370 I 0.786
POPTR_0001s38100 Populus trichocarpa POPTR_0001s38100 N 0.786
GSMUA_Achr7G01070_001 Musa acuminata GSMUA_Achr7G01070_001 N 0.786
OB08G15650 Oryza brachyantha OB08G15650 N 0.786
OS03G0411100 Oryza sativa OS03G0411100 N 0.786
BGIOSGA012852 Oryza indica BGIOSGA012852 N 0.786
Pavir.J06649 Panicum virgatum Pavir.J06649 N 0.786
orange1.1g026474m.g Citrus sinensis orange1.1g026474m.g N 0.786
LPERR08G05240 Leersia perrieri LPERR08G05240 N 0.786
Ciclev10016491m.g Citrus clementina Ciclev10016491m.g N 0.786
estExt_fgenesh2_pg.C_Chr_130205 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_130205 N 0.762
Bra031242 Brassica rapa Bra031242 I 0.762
Carubv10024092m.g Capsella rubella Carubv10024092m.g N 0.762
PK21261.1 Cannabis sativa PK21261.1 I 0.762
AMTR_s00103p00144230 Amborella trichopoda AMTR_s00103p00144230 I 0.762
Bo5g105110 Brassica oleracea Bo5g105110 I 0.762
Cagra.10399s0005 Capsella grandiflora Cagra.10399s0005 N 0.762
Bostr.19424s0556 Boechera stricta Bostr.19424s0556 N 0.762
Ca_20250 Cicer arietinum Ca_20250 N 0.762
Aquca_026_00359 Aquilegia coerulea Aquca_026_00359 N 0.762
Ocbimv22027261m.g Octopus bimaculoides Ocbimv22027261m.g I 0.762
Bra023913 Brassica rapa Bra023913 N 0.762
Cagra.3346s0024 Capsella grandiflora Cagra.3346s0024 N 0.762
mgf012950m Mimulus guttatus mgf012950m I 0.762
NFYA9 Arabidopsis thaliana AT3G20910 N 0.762
Carubv10014289m.g Capsella rubella Carubv10014289m.g N 0.762
Gorai.013G251200 Gossypium raimondii Gorai.013G251200 N 0.762
Solyc01g008490.2 Solanum lycopersicum Solyc01g008490.2 N 0.762
Thhalv10021240m.g Eutrema salsugineum Thhalv10021240m.g I 0.762
NF-YA9 Arabidopsis lyrata scaffold_302497.1 N 0.762
POPTR_0006s05210 Populus trichocarpa POPTR_0006s05210 I 0.762
OPUNC08G05330 Oryza punctata OPUNC08G05330 N 0.762
VIT_08s0007g08250 Vitis vinifera VIT_08s0007g08250 I 0.762
CAOG_07995 Capsaspora owczarzaki CAOG_07995 I 0.762
ACUA028400 Anopheles culicifacies ACUA028400 I 0.738
GSMUA_Achr4G03600_001 Musa acuminata GSMUA_Achr4G03600_001 N 0.738
CGI_10012001 Crassostrea gigas CGI_10012001 I 0.738
PGSC0003DMG401021124 Solanum tuberosum PGSC0003DMG401021124 N 0.738
CPIJ017497 Culex quinquefasciatus CPIJ017497 I 0.738
POPTR_0009s05760 Populus trichocarpa POPTR_0009s05760 N 0.738
Bo3g060160 Brassica oleracea Bo3g060160 N 0.738
AMTR_s00024p00195160 Amborella trichopoda AMTR_s00024p00195160 I 0.738
Eucgr.J00764 Eucalyptus grandis Eucgr.J00764 N 0.738
Eucgr.A02381 Eucalyptus grandis Eucgr.A02381 N 0.738
CpipJ_CPIJ017497 Culex pipiens CpipJ_CPIJ017497 I 0.738
CpipJ_CPIJ010764 Culex pipiens CpipJ_CPIJ010764 I 0.738
LPERR03G25340 Leersia perrieri LPERR03G25340 I 0.738
Ciclev10005144m.g Citrus clementina Ciclev10005144m.g I 0.738
AMAM001825 Anopheles maculatus AMAM001825 I 0.738
GSMUA_Achr4G28390_001 Musa acuminata GSMUA_Achr4G28390_001 N 0.738
Sb08g021910 Sorghum bicolor Sb08g021910 N 0.738
orange1.1g017825m.g Citrus sinensis orange1.1g017825m.g I 0.738
Traes_4DS_AFBE29C20 Triticum aestivum Traes_4DS_AFBE29C20 I 0.738
Traes_4BS_B7B7EFF37 Triticum aestivum Traes_4BS_B7B7EFF37 I 0.738
EuGene.0000150165 Micromonas pusilla EuGene.0000150165 N 0.738
GLYMA05G29970 Glycine max GLYMA05G29970 N 0.738
Gorai.004G066000 Gossypium raimondii Gorai.004G066000 I 0.738
BRADI1G11800 Brachypodium distachyon BRADI1G11800 I 0.738
TRIUR3_09920 Triticum urartu TRIUR3_09920 I 0.738
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N 0.738
Traes_4AL_7C4C68FD0 Triticum aestivum Traes_4AL_7C4C68FD0 I 0.738
Genemark1.1758_g Coccomyxa subellipsoidea C169 Genemark1.1758_g I 0.738
CPIJ010764 Culex quinquefasciatus CPIJ010764 I 0.738
fgeneshCV_pg.C_scaffold_3000204 Chlorella vulgaris fgeneshCV_pg.C_scaffold_3000204 I 0.738
GRMZM2G165488 Zea mays GRMZM2G165488 N 0.738
VIT_13s0064g00860 Vitis vinifera VIT_13s0064g00860 I 0.738
GLYMA12G36540 Glycine max GLYMA12G36540 I 0.738
Lus10012202.g Linum usitatissimum Lus10012202.g I 0.714
Pavir.J08102 Panicum virgatum Pavir.J08102 I 0.714
orange1.1g019764m.g Citrus sinensis orange1.1g019764m.g N 0.714
Pavir.Ia00780 Panicum virgatum Pavir.Ia00780 I 0.714
Lus10011326.g Linum usitatissimum Lus10011326.g I 0.714
LDEC000161 Leptinotarsa decemlineata LDEC000161 I 0.714
SINV17788 Solenopsis invicta SINV17788 I 0.714
GRMZM5G829103 Zea mays GRMZM5G829103 N 0.714
GRMZM2G091964 Zea mays GRMZM2G091964 I 0.714
GLYMA15G13660 Glycine max GLYMA15G13660 N 0.714
LPERR03G22840 Leersia perrieri LPERR03G22840 N 0.714
LPERR12G16030 Leersia perrieri LPERR12G16030 N 0.714
NV16776 Nasonia vitripennis NV16776 I 0.714
MTR_2g030170 Medicago truncatula MTR_2g030170 N 0.714
MLOC_76757 Hordeum vulgare MLOC_76757 N 0.714
GLYMA10G10240 Glycine max GLYMA10G10240 N 0.714
GLYMA09G02770 Glycine max GLYMA09G02770 N 0.714
BGIOSGA035818 Oryza indica BGIOSGA035818 N 0.714
UNE8 Arabidopsis thaliana AT3G05690 N 0.714
ACEP21720 Atta cephalotes ACEP21720 I 0.714
Bo5g145140 Brassica oleracea Bo5g145140 N 0.714
BRADI4G01380 Brachypodium distachyon BRADI4G01380 N 0.714
GB50732 Apis mellifera GB50732 I 0.714
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N 0.714
F775_09086 Aegilops tauschii F775_09086 N 0.714
ORUFI12G21270 Oryza rufipogon ORUFI12G21270 N 0.714
OS12G0618600 Oryza sativa OS12G0618600 N 0.714
Ca_00866 Cicer arietinum Ca_00866 N 0.714
YQE_10237 Dendroctonus ponderosae YQE_10237 I 0.714
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N 0.714
Ca_07995 Cicer arietinum Ca_07995 N 0.714
Cflo_01621--XP_001121566.1_APIME Camponotus floridanus Cflo_01621--XP_001121566.1_APIME I 0.714
fgeneshMC_pg.10_#_374 Mucor circinelloides fgeneshMC_pg.10_#_374 I 0.714
cassava36568.valid.m1 Manihot esculenta cassava36568.valid.m1 I 0.714
Hsal_09569--XP_001121566.1_APIME Harpegnathos saltator Hsal_09569--XP_001121566.1_APIME I 0.714
TRIUR3_28596 Triticum urartu TRIUR3_28596 N 0.714
Traes_5DS_443F1993A Triticum aestivum Traes_5DS_443F1993A N 0.714
Si037045m.g Setaria italica Si037045m.g I 0.714
Sb01g011220 Sorghum bicolor Sb01g011220 I 0.714
PHUM011400 Pediculus humanus PHUM011400 I 0.714
Solyc01g087240.2 Solanum lycopersicum Solyc01g087240.2 I 0.714
TC007453 Tribolium castaneum TC007453 I 0.714
Traes_5BS_F1DE20B4B Triticum aestivum Traes_5BS_F1DE20B4B N 0.714
Traes_5AS_378F353CF Triticum aestivum Traes_5AS_378F353CF N 0.714
TCM_040712 Theobroma cacao TCM_040712 I 0.714
Bostr.2570s0105 Boechera stricta Bostr.2570s0105 N 0.714