CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Tigd2
(
Rattus norvegicus
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04218 (CENP-B_N)
IPR006695
ENSRNOG00000038449
T161731_2.00
Ensembl (2018-Dec-8)
Link out
NCBI Gene Info:
Predicted to enable DNA binding activity. Predicted to be active in nucleus. Orthologous to human TIGD2 (tigger transposable element derived 2). [provided by Alliance of Genome Resources, Apr 2022]
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TIGD2
M01206_2.00
Monodelphis domestica
NNNRCGGWWR
YWWCCGYNNN
PBM
Lambert et al.(2019)
pTH11439
0.922
0.922
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000055379
CENPB
4
54
KRKRVVLTIKDKLDIIKKLEEGNSFKKLSVLYGIGESTVRDIKKNKERIIN
Links
Other
CENPB
family TFs
Other
Rattus norvegicus
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy