CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCU00392
(
Neurospora crassa
)
CENPB
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
IPR006695
NCU00392
T162547_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU00392
M01898_2.00
Neurospora crassa
YGTCACAY
RTGTGACR
PBM
Weirauch et al.(2014)
pTH9311
(Direct)
(Direct)
NCU00392
M01899_2.00
Neurospora crassa
NRTCACNN
NNGTGAYN
PBM
Weirauch et al.(2014)
pTH9658
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.700
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01898_2.00
CENPB
51
105
SQPRKTLTDEDRRRMCQYAMDHPTAKQTDIGAQFGVERSTVSKVLRHRDKYLNLE
M01899_2.00
CENPB
52
106
SQPRKTLTDEDRRRMCQYAMDHPTAKQTDIGAQFGVERSTVSKVLRHRDKYLNLE
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NCU00392
CENPB
138
192
SQPRKTLTDEDRRRMCQYAMDHPTAKQTDIGAQFGVERSTVSKVLRHRDKYLNLE
Links
Other
CENPB
family TFs
Other
Neurospora crassa
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy