CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.20.110.1
(
Cochliobolus heterostrophus C5
)
CENPB,Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04218 (CENP-B_N)
PF05225 (HTH_psq)
IPR006695
IPR007889
gw1.20.110.1
T162980_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.20.110.1
Pipsqueak
1
46
MTALTKAIAAIDSQDAEGQLSYRAAAKKFGVELTTLTRRHQNKTQS
gw1.20.110.1
CENPB
52
71
AKRQLLTPPQESELVKYIEK
Links
Other
CENPB,Pipsqueak
family TFs
Other
Cochliobolus heterostrophus C5
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
COCVIDRAFT_116437
Bipolaris victoriae
COCVIDRAFT_116437
N
0.800