AMTR_s00045p00052450 (Amborella trichopoda)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 AMTR_s00045p00052450 T163001_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.781 0.781
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD

HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.746 0.746
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN

NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.719 0.719
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN01955 CG-1 17 131

Links

Other CG-1 family TFs
Other Amborella trichopoda TFs

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169 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action