AMTR_s00057p00042800 (Amborella trichopoda)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 AMTR_s00057p00042800 T163002_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16758 CG-1 41 155

Links

Other CG-1 family TFs
Other Amborella trichopoda TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo3g109540 Brassica oleracea Bo3g109540 I 0.000
Lus10032919.g Linum usitatissimum Lus10032919.g I 0.000
Lus10015587.g Linum usitatissimum Lus10015587.g I 0.000
SapurV1A.0666s0060 Salix purpurea SapurV1A.0666s0060 N 0.000
SapurV1A.0662s0040 Salix purpurea SapurV1A.0662s0040 N 0.000
SapurV1A.0326s0320 Salix purpurea SapurV1A.0326s0320 N 0.000
evm.TU.supercontig_3.170 Carica papaya evm.TU.supercontig_3.170 N 0.000
Cucsa.273280 Cucumis sativus Cucsa.273280 N 0.000
cassava11768.valid.m1 Manihot esculenta cassava11768.valid.m1 N 0.000
29764.m000758 Ricinus communis 29764.m000758 N 0.000
Cla002432 Citrullus lanatus Cla002432 N 0.000
POPTR_0012s00760 Populus trichocarpa POPTR_0012s00760 N 0.000
SapurV1A.2735s0030 Salix purpurea SapurV1A.2735s0030 N 0.000