AT3G16940 (Arabidopsis thaliana)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 AT3G16940 T163006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.868 0.868
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G16940.1 CG-1 31 145
AT3G16940.2 CG-1 31 145
AT3G16940.3 CG-1 4 118

Links

Other CG-1 family TFs
Other Arabidopsis thaliana TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000018065 Ailuropoda melanoleuca ENSAMEG00000018065 N 0.000
ENSSTOG00000016375 Ictidomys tridecemlineatus ENSSTOG00000016375 N 0.000
TriadG30764 Trichoplax adhaerens TriadG30764 N 0.000
Aan_R002286 Calypte anna Aan_R002286 N 0.000
Afo_R011026 Aptenodytes forsteri Afo_R011026 N 0.000
Alligator_sinensis_CCG004796.1 Alligator sinensis Alligator_sinensis_CCG004796.1 N 0.000
Brh_R008711 Buceros rhinoceros Brh_R008711 N 0.000
Gfo_R011712 Geospiza fortis Gfo_R011712 N 0.000
Myotis_brandtii_ZNF474_10015777 Myotis brandtii Myotis_brandtii_ZNF474_10015777 N 0.000
ALUE_0001791501 Ascaris lumbricoides ALUE_0001791501 N 0.000
ASU_10872 Ascaris suum ASU_10872 N 0.000
csin113363 Clonorchis sinensis csin113363 N 0.000
D915_04895 Fasciola hepatica D915_04895 N 0.000
GPUH_0000232501 Gongylonema pulchrum GPUH_0000232501 N 0.000
PEQ_0000518801 Parascaris equorum PEQ_0000518801 N 0.000
ENSSHAG00000015313 Sarcophilus harrisii ENSSHAG00000015313 N 0.000
Zfp474 Rattus norvegicus ENSRNOG00000018724 N 0.000
ENSAMEG00000018896 Ailuropoda melanoleuca ENSAMEG00000018896 N 0.000
ENSBTAG00000019881 Bos taurus ENSBTAG00000019881 N 0.000
ENSCJAG00000017194 Callithrix jacchus ENSCJAG00000017194 N 0.000
ENSCPOG00000015378 Cavia porcellus ENSCPOG00000015378 N 0.000
ENSECAG00000014754 Equus caballus ENSECAG00000014754 N 0.000
ENSEEUG00000015300 Erinaceus europaeus ENSEEUG00000015300 N 0.000
ENSFALG00000007585 Ficedula albicollis ENSFALG00000007585 N 0.000
ENSLAFG00000026326 Loxodonta africana ENSLAFG00000026326 N 0.000
ENSMICG00000000240 Microcebus murinus ENSMICG00000000240 N 0.000
1700034E13Rik Mus musculus ENSMUSG00000024532 N 0.000
Zfp474 Mus musculus ENSMUSG00000046886 N 0.000
ENSNLEG00000011997 Nomascus leucogenys ENSNLEG00000011997 N 0.000
ENSOARG00000000312 Ovis aries ENSOARG00000000312 N 0.000
ENSPSIG00000010438 Pelodiscus sinensis ENSPSIG00000010438 N 0.000
TCNE_0000409101 Toxocara canis TCNE_0000409101 N 0.000