AT3G16940 (Arabidopsis thaliana)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 AT3G16940 T163006_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.868 0.868
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.702 0.702
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G16940.1 CG-1 31 145
AT3G16940.2 CG-1 31 145
AT3G16940.3 CG-1 4 118

Links

Other CG-1 family TFs
Other Arabidopsis thaliana TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R011698 Calypte anna Aan_R011698 N 0.000
Afo_R010057 Aptenodytes forsteri Afo_R010057 N 0.000
Alligator_sinensis_CCG000430.1 Alligator sinensis Alligator_sinensis_CCG000430.1 N 0.000
Brh_R003386 Buceros rhinoceros Brh_R003386 N 0.000
ENSAMEG00000003491 Ailuropoda melanoleuca ENSAMEG00000003491 I 0.000
ENSAMXG00000017952 Astyanax mexicanus ENSAMXG00000017952 I 0.000
ENSAPLG00000003384 Anas platyrhynchos ENSAPLG00000003384 N 0.000
ENSFCAG00000022047 Felis catus ENSFCAG00000022047 I 0.000
ENSGACG00000018294 Gasterosteus aculeatus ENSGACG00000018294 I 0.000
ENSGMOG00000008953 Gadus morhua ENSGMOG00000008953 I 0.000
ENSLACG00000016038 Latimeria chalumnae ENSLACG00000016038 I 0.000
ENSLOCG00000003370 Lepisosteus oculatus ENSLOCG00000003370 I 0.000
ENSLOCG00000006043 Lepisosteus oculatus ENSLOCG00000006043 N 0.000
ENSMEUG00000003078 Macropus eugenii ENSMEUG00000003078 N 0.000
ENSMPUG00000008045 Mustela putorius furo ENSMPUG00000008045 N 0.000
ENSOARG00000004770 Ovis aries ENSOARG00000004770 I 0.000
ENSONIG00000012635 Oreochromis niloticus ENSONIG00000012635 I 0.000
ENSP00000156825 Macaca fascicularis ENSP00000156825 N 0.000
ENSP00000256429-D1 Bos grunniens ENSP00000256429-D1 I 0.000
ENSPANG00000015324 Papio anubis ENSPANG00000015324 N 0.000
ENSPPYG00000009325 Pongo abelii ENSPPYG00000009325 I 0.000
ENSSHAG00000013346 Sarcophilus harrisii ENSSHAG00000013346 N 0.000
ENSTRUG00000006522 Takifugu rubripes ENSTRUG00000006522 I 0.000
ENSXMAG00000003932 Xiphophorus maculatus ENSXMAG00000003932 I 0.000
ENSXMAG00000012716 Xiphophorus maculatus ENSXMAG00000012716 I 0.000
Gfo_R007597 Geospiza fortis Gfo_R007597 N 0.000
MBD2 Callithrix jacchus ENSCJAG00000001862 I 0.000
MBD2 Microcebus murinus ENSMICG00000008970 I 0.000
MBD3 Homo sapiens ENSG00000071655 N 0.000
MBD3 Tetraodon nigroviridis ENSTNIG00000010627 N 0.000
Mbd3 Rattus norvegicus ENSRNOG00000028956 N 0.000
MBD3 Canis familiaris ENSCAFG00000019503 N 0.000
MBD3 Equus caballus ENSECAG00000015485 I 0.000
MBD3 Felis catus ENSFCAG00000000763 I 0.000
MBD3 Gasterosteus aculeatus ENSGACG00000012755 I 0.000
MBD3 Monodelphis domestica ENSMODG00000004125 N 0.000
Mbd3 Mus musculus ENSMUSG00000035478 N 0.000
MBD3 Meleagris gallopavo ENSMGAG00000002493 N 0.000
MBD3 Ochotona princeps ENSOPRG00000008719 I 0.000
MBD3 Ornithorhynchus anatinus ENSOANG00000003672 N 0.000
mbd3.S Xenopus laevis XB-GENE-491557 I 0.000
mbd3a Danio rerio ENSDARG00000061774 I 0.000
mbd3b Danio rerio ENSDARG00000042029 I 0.000
Myotis_brandtii_MBD3_10015627 Myotis brandtii Myotis_brandtii_MBD3_10015627 N 0.000
Pvit_04402 Pogona vitticeps Pvit_04402 I 0.000
Tal_R008196 Tyto alba Tal_R008196 N 0.000