Bo5g123580 (Brassica oleracea)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Bo5g123580 T163024_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.860 0.860
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g123580.1 CG-1 32 146

Links

Other CG-1 family TFs
Other Brassica oleracea TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GTF2IRD1 Homo sapiens ENSG00000006704 D 0.000
gtf2ird1.S Xenopus laevis XB-GENE-5857419 I 0.000
gtf2ird1 Tetraodon nigroviridis ENSTNIG00000004695 I 0.000
GTF2IRD1 Taeniopygia guttata ENSTGUG00000003638 I 0.000
GTF2IRD1 Tupaia belangeri ENSTBEG00000014017 I 0.000
ENSSTOG00000014343 Ictidomys tridecemlineatus ENSSTOG00000014343 I 0.000
GTF2IRD1 Sus scrofa ENSSSCG00000007720 I 0.000
LOC100912262 Rattus norvegicus ENSRNOG00000050193 I 0.000
Gtf2ird1 Rattus norvegicus ENSRNOG00000001478 I 0.000
GTF2IRD1 Pan troglodytes ENSPTRG00000019292 I 0.000
ENSPSIG00000012562 Pelodiscus sinensis ENSPSIG00000012562 I 0.000
ENSPPYG00000017485 Pongo abelii ENSPPYG00000017485 I 0.000
gtf2ird1 Takifugu rubripes ENSTRUG00000010068 I 0.000
ENSXMAG00000015294 Xiphophorus maculatus ENSXMAG00000015294 I 0.000
Aan_R007261 Calypte anna Aan_R007261 I 0.000
gtf2ird1 Xenopus tropicalis XB-GENE-5857402 I 0.000
B7ZQJ9 Xenopus laevis B7ZQJ9 I 0.000
Tal_R007678 Tyto alba Tal_R007678 I 0.000
Pvit_17519 Pogona vitticeps Pvit_17519 I 0.000
Myotis_brandtii_GTF2IRD1_10014286 Myotis brandtii Myotis_brandtii_GTF2IRD1_10014286 I 0.000
Gfo_R013537 Geospiza fortis Gfo_R013537 I 0.000
ENSP00000397566 Macaca fascicularis ENSP00000397566 I 0.000
Cmyd_10014806 Chelonia mydas Cmyd_10014806 I 0.000
Brh_R010572 Buceros rhinoceros Brh_R010572 I 0.000
Alligator_sinensis_CCG003099.1 Alligator sinensis Alligator_sinensis_CCG003099.1 I 0.000
ENSPFOG00000001233 Poecilia formosa ENSPFOG00000001233 I 0.000
gtf2ird1 Oryzias latipes ENSORLG00000015316 I 0.000
GTF2IRD1 Otolemur garnettii ENSOGAG00000013029 I 0.000
gtf2ird1 Gasterosteus aculeatus ENSGACG00000020844 I 0.000
GTF2IRD1 Felis catus ENSFCAG00000006551 I 0.000
GTF2IRD1 Equus caballus ENSECAG00000019745 I 0.000
GTF2IRD1 Dasypus novemcinctus ENSDNOG00000024296 I 0.000
gtf2ird1 Danio rerio ENSDARG00000022203 I 0.000
GTF2IRD1 Cavia porcellus ENSCPOG00000004421 I 0.000
GTF2IRD1 Canis familiaris ENSCAFG00000011763 I 0.000
GTF2IRD1 Bos taurus ENSBTAG00000006212 I 0.000
ENSAPLG00000006811 Anas platyrhynchos ENSAPLG00000006811 I 0.000
ENSAMXG00000007482 Astyanax mexicanus ENSAMXG00000007482 I 0.000
GTF2IRD1 Gallus gallus ENSGALG00000001263 I 0.000
ENSGMOG00000013638 Gadus morhua ENSGMOG00000013638 I 0.000
GTF2IRD1 Oryctolagus cuniculus ENSOCUG00000026916 I 0.000
ENSOARG00000011517 Ovis aries ENSOARG00000011517 I 0.000
Gtf2ird1 Mus musculus ENSMUSG00000023079 I 0.000
ENSMPUG00000016153 Mustela putorius furo ENSMPUG00000016153 I 0.000
GTF2IRD1 Macaca mulatta ENSMMUG00000018842 I 0.000
GTF2IRD1 Myotis lucifugus ENSMLUG00000001668 I 0.000
GTF2IRD1 Meleagris gallopavo ENSMGAG00000016801 I 0.000
ENSMEUG00000012139 Macropus eugenii ENSMEUG00000012139 I 0.000
ENSLOCG00000002184 Lepisosteus oculatus ENSLOCG00000002184 I 0.000
ENSLACG00000018407 Latimeria chalumnae ENSLACG00000018407 I 0.000
ENSAMEG00000015311 Ailuropoda melanoleuca ENSAMEG00000015311 I 0.000
ENSFALG00000007085 Ficedula albicollis ENSFALG00000007085 N 0.000