Bra004217 (Brassica rapa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Bra004217 T163032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra004217.1-P CG-1 13 132

Links

Other CG-1 family TFs
Other Brassica rapa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Bo6g103720 Brassica oleracea Bo6g103720 N 0.991
Bra034007 Brassica rapa Bra034007 N 0.825
Bra004096 Brassica rapa Bra004096 N 0.825
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N 0.816
Bo6g099030 Brassica oleracea Bo6g099030 N 0.816
Bo2g055720 Brassica oleracea Bo2g055720 N 0.816
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N 0.807
Carubv10022369m.g Capsella rubella Carubv10022369m.g N 0.798
CMTA4 Arabidopsis thaliana AT1G67310 N 0.789
fgenesh1_pm.C_scaffold_2000778 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000778 N 0.781
PK06349.1 Cannabis sativa PK06349.1 N 0.746
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.737
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.737
mgf025436m Mimulus guttatus mgf025436m N 0.728
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.719
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.719
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.719
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.719
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.711
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.702
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.702
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.702
MDP0000262800 Malus domestica MDP0000262800 N 0.702