Bra038040 (Brassica rapa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Bra038040 T163042_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.930 0.930
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra038040.1-P CG-1 31 145

Links

Other CG-1 family TFs
Other Brassica rapa TFs

68 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA012915 Oryza indica BGIOSGA012915 N 0.000
OB03G31070 Oryza brachyantha OB03G31070 N 0.000
OGLUM03G22800 Oryza glumaepatula OGLUM03G22800 N 0.000
OLONG_010547 Oryza longistaminata OLONG_010547 N 0.000
OMERI03G19860 Oryza meridionalis OMERI03G19860 N 0.000
ONIVA03G23870 Oryza nivara ONIVA03G23870 N 0.000
OPUNC03G20760 Oryza punctata OPUNC03G20760 N 0.000
ORGLA03G0204400 Oryza glaberrima ORGLA03G0204400 N 0.000
ORUFI03G22740 Oryza rufipogon ORUFI03G22740 N 0.000
OS03G0425800 Oryza sativa OS03G0425800 N 0.000
Pavir.Ia04672 Panicum virgatum Pavir.Ia04672 N 0.000
Pavir.J38487 Panicum virgatum Pavir.J38487 N 0.000
Sb01g032240 Sorghum bicolor Sb01g032240 N 0.000
Si038913m.g Setaria italica Si038913m.g N 0.000