fgenesh1_pg.C_scaffold_7002321 (Arabidopsis lyrata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 fgenesh1_pg.C_scaffold_7002321 T163174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
1.000 1.000
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_7002321 CG-1 31 145

Links

Other CG-1 family TFs
Other Arabidopsis lyrata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aan_R003120 Calypte anna Aan_R003120 I 0.000
Afo_R012275 Aptenodytes forsteri Afo_R012275 I 0.000
Alligator_sinensis_CCG022066.1 Alligator sinensis Alligator_sinensis_CCG022066.1 I 0.000
Brh_R005630 Buceros rhinoceros Brh_R005630 I 0.000
Cmyd_10012423 Chelonia mydas Cmyd_10012423 I 0.000
ENSACAG00000012378 Anolis carolinensis ENSACAG00000012378 I 0.000
ENSAMXG00000025873 Astyanax mexicanus ENSAMXG00000025873 I 0.000
ENSAPLG00000001024 Anas platyrhynchos ENSAPLG00000001024 I 0.000
BHLHA15 Bos taurus ENSBTAG00000046010 I 0.000
BHLHA15 Canis familiaris ENSCAFG00000015425 I 0.000
BHLHA15 Callithrix jacchus ENSCJAG00000023085 I 0.000
ENSCPOG00000009423 Cavia porcellus ENSCPOG00000009423 I 0.000
ENSCSAG00000019492 Chlorocebus sabaeus ENSCSAG00000019492 I 0.000
bhlha15 Danio rerio ENSDARG00000045166 I 0.000
ENSECAG00000012532 Equus caballus ENSECAG00000012532 I 0.000
BHLHA15 Homo sapiens ENSG00000180535 D 0.000
bhlha15 Gasterosteus aculeatus ENSGACG00000009403 I 0.000
ENSGMOG00000003972 Gadus morhua ENSGMOG00000003972 I 0.000
BHLHA15 Loxodonta africana ENSLAFG00000000139 I 0.000
BHLHA15 Meleagris gallopavo ENSMGAG00000015527 I 0.000
BHLHA15 Myotis lucifugus ENSMLUG00000009476 I 0.000
ENSMMUG00000015478 Macaca mulatta ENSMMUG00000015478 I 0.000
BHLHA15 Monodelphis domestica ENSMODG00000025044 I 0.000
ENSMPUG00000020102 Mustela putorius furo ENSMPUG00000020102 I 0.000
Bhlha15 Mus musculus ENSMUSG00000052271 D 0.000
ENSNLEG00000018875 Nomascus leucogenys ENSNLEG00000018875 I 0.000
BHLHA15 Ornithorhynchus anatinus ENSOANG00000001937 I 0.000
BHLHA15 Oryctolagus cuniculus ENSOCUG00000025058 I 0.000
BHLHA15 Otolemur garnettii ENSOGAG00000010106 I 0.000
ENSONIG00000021203 Oreochromis niloticus ENSONIG00000021203 I 0.000
bhlha15 Oryzias latipes ENSORLG00000003401 I 0.000
ENSP00000326391 Macaca fascicularis ENSP00000326391 I 0.000
ENSP00000326391-D1 Bos grunniens ENSP00000326391-D1 I 0.000
ENSPANG00000010823 Papio anubis ENSPANG00000010823 I 0.000
ENSPFOG00000013242 Poecilia formosa ENSPFOG00000013242 I 0.000
ENSPPYG00000017361 Pongo abelii ENSPPYG00000017361 I 0.000
ENSPSIG00000001236 Pelodiscus sinensis ENSPSIG00000001236 I 0.000
BHLHA15 Pan troglodytes ENSPTRG00000019434 I 0.000
Bhlha15 Rattus norvegicus ENSRNOG00000025164 I 0.000
ENSSHAG00000015620 Sarcophilus harrisii ENSSHAG00000015620 I 0.000
ENSSSCG00000007600 Sus scrofa ENSSSCG00000007600 I 0.000
ENSSTOG00000009728 Ictidomys tridecemlineatus ENSSTOG00000009728 I 0.000
bhlha15 Tetraodon nigroviridis ENSTNIG00000012887 I 0.000
bhlha15 Takifugu rubripes ENSTRUG00000016815 I 0.000
BHLHA15 Tursiops truncatus ENSTTRG00000015701 I 0.000
ENSXMAG00000014837 Xiphophorus maculatus ENSXMAG00000014837 I 0.000
estExt_fgenesh2_pg.C_2400032 Branchiostoma floridae estExt_fgenesh2_pg.C_2400032 I 0.000
Gfo_R007094 Geospiza fortis Gfo_R007094 I 0.000
Ogr03050 Ophisaurus gracilis Ogr03050 I 0.000
Pvit_16465 Pogona vitticeps Pvit_16465 I 0.000
Tal_R009599 Tyto alba Tal_R009599 I 0.000
XP_002931994 Xenopus tropicalis XP_002931994 I 0.000