fgenesh1_pg.C_scaffold_7002321 (Arabidopsis lyrata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 fgenesh1_pg.C_scaffold_7002321 T163174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
1.000 1.000
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_7002321 CG-1 31 145

Links

Other CG-1 family TFs
Other Arabidopsis lyrata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000006549 Ailuropoda melanoleuca ENSAMEG00000006549 I 0.000
Alligator_sinensis_CCG005947.1 Alligator sinensis Alligator_sinensis_CCG005947.1 I 0.000
ENSAPLG00000003549 Anas platyrhynchos ENSAPLG00000003549 I 0.000
MLX Anolis carolinensis ENSACAG00000013679 I 0.000
Afo_R011293 Aptenodytes forsteri Afo_R011293 N 0.000
MLX Callithrix jacchus ENSCJAG00000005011 I 0.000
MLX Canis familiaris ENSCAFG00000029102 I 0.000
Cmyd_10007085 Chelonia mydas Cmyd_10007085 I 0.000
ENSCSAG00000003241 Chlorocebus sabaeus ENSCSAG00000003241 I 0.000
MLX Dasypus novemcinctus ENSDNOG00000045315 I 0.000
MLX Echinops telfairi ENSETEG00000017247 I 0.000
MLX Equus caballus ENSECAG00000023980 I 0.000
MLX Felis catus ENSFCAG00000011667 I 0.000
ENSFALG00000000692 Ficedula albicollis ENSFALG00000000692 N 0.000
Gfo_R009040 Geospiza fortis Gfo_R009040 N 0.000
MLX Gorilla gorilla ENSGGOG00000010869 I 0.000
MLX Homo sapiens ENSG00000108788 D 0.000
ENSSTOG00000003660 Ictidomys tridecemlineatus ENSSTOG00000003660 I 0.000
MLX Loxodonta africana ENSLAFG00000000328 I 0.000
ENSP00000246912 Macaca fascicularis ENSP00000246912 I 0.000
MLX Macaca mulatta ENSMMUG00000009887 I 0.000
MLX Microcebus murinus ENSMICG00000010258 I 0.000
MLX Monodelphis domestica ENSMODG00000014918 D 0.000
ENSMPUG00000010285 Mustela putorius furo ENSMPUG00000010285 I 0.000
Mlx Mus musculus ENSMUSG00000017801 D 0.000
MLX Myotis lucifugus ENSMLUG00000016670 I 0.000
MLX Ochotona princeps ENSOPRG00000012322 I 0.000
Ogr17012 Ophisaurus gracilis Ogr17012 I 0.000
MLX Oryctolagus cuniculus ENSOCUG00000015210 I 0.000
MLX Otolemur garnettii ENSOGAG00000009867 I 0.000
ENSOARG00000002343 Ovis aries ENSOARG00000002343 I 0.000
MLX Pan troglodytes ENSPTRG00000009208 I 0.000
ENSPANG00000021416 Papio anubis ENSPANG00000021416 I 0.000
ENSPSIG00000015412 Pelodiscus sinensis ENSPSIG00000015412 I 0.000
Pvit_17633 Pogona vitticeps Pvit_17633 I 0.000
ENSPPYG00000008387 Pongo abelii ENSPPYG00000008387 I 0.000
MLX Procavia capensis ENSPCAG00000014225 I 0.000
MLX Pteropus vampyrus ENSPVAG00000016556 I 0.000
Mlx Rattus norvegicus ENSRNOG00000019983 I 0.000
ENSSHAG00000014167 Sarcophilus harrisii ENSSHAG00000014167 I 0.000
MLX Sorex araneus ENSSARG00000014166 I 0.000
MLX Sus scrofa ENSSSCG00000017397 I 0.000
MLX Taeniopygia guttata ENSTGUG00000002694 N 0.000
ENSTSYG00000007534 Tarsius syrichta ENSTSYG00000007534 I 0.000
MLX Tupaia belangeri ENSTBEG00000002111 I 0.000
MLX Tursiops truncatus ENSTTRG00000016407 I 0.000