fgenesh1_pg.C_scaffold_7002321 (Arabidopsis lyrata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 fgenesh1_pg.C_scaffold_7002321 T163174_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
1.000 1.000
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_scaffold_7002321 CG-1 31 145

Links

Other CG-1 family TFs
Other Arabidopsis lyrata TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000014572 Ailuropoda melanoleuca ENSAMEG00000014572 I 0.000
ENSP00000312834-D1 Bos grunniens ENSP00000312834-D1 I 0.000
MLXIP Bos taurus ENSBTAG00000004189 I 0.000
ENSCJAG00000020340 Callithrix jacchus ENSCJAG00000020340 I 0.000
MLXIP Canis familiaris ENSCAFG00000007965 I 0.000
ENSCSAG00000002159 Chlorocebus sabaeus ENSCSAG00000002159 I 0.000
MLXIP Dasypus novemcinctus ENSDNOG00000012530 I 0.000
Mlxip Dipodomys ordii ENSDORG00000005954 I 0.000
MLXIP Equus caballus ENSECAG00000012056 I 0.000
MLXIP Erinaceus europaeus ENSEEUG00000010841 I 0.000
MLXIP Felis catus ENSFCAG00000012108 I 0.000
MLXIP Gorilla gorilla ENSGGOG00000022345 I 0.000
MLXIP Homo sapiens ENSG00000175727 I 0.000
ENSSTOG00000001742 Ictidomys tridecemlineatus ENSSTOG00000001742 I 0.000
MLXIP Loxodonta africana ENSLAFG00000016436 I 0.000
ENSP00000312834 Macaca fascicularis ENSP00000312834 I 0.000
MLXIP Macaca mulatta ENSMMUG00000012652 I 0.000
ENSMEUG00000000276 Macropus eugenii ENSMEUG00000000276 I 0.000
MLXIP Microcebus murinus ENSMICG00000001163 I 0.000
MLXIP Monodelphis domestica ENSMODG00000012174 I 0.000
ENSMPUG00000002022 Mustela putorius furo ENSMPUG00000002022 I 0.000
Mlxip Mus musculus ENSMUSG00000038342 D 0.000
Myotis_brandtii_Mlxip_10021734 Myotis brandtii Myotis_brandtii_Mlxip_10021734 I 0.000
MLXIP Myotis lucifugus ENSMLUG00000017230 I 0.000
ENSNLEG00000001393 Nomascus leucogenys ENSNLEG00000001393 I 0.000
MLXIP Ochotona princeps ENSOPRG00000016617 I 0.000
MLXIP Oryctolagus cuniculus ENSOCUG00000011261 I 0.000
MLXIP Otolemur garnettii ENSOGAG00000005992 I 0.000
ENSOARG00000012001 Ovis aries ENSOARG00000012001 I 0.000
MLXIP Pan troglodytes ENSPTRG00000005573 I 0.000
ENSPANG00000019208 Papio anubis ENSPANG00000019208 I 0.000
ENSPPYG00000005061 Pongo abelii ENSPPYG00000005061 I 0.000
MLXIP Procavia capensis ENSPCAG00000007368 I 0.000
Mlxip Rattus norvegicus ENSRNOG00000001255 I 0.000
ENSSHAG00000007918 Sarcophilus harrisii ENSSHAG00000007918 I 0.000
MLXIP Sus scrofa ENSSSCG00000009794 I 0.000
MLXIP Tursiops truncatus ENSTTRG00000003024 I 0.000
mlxip Xenopus tropicalis XB-GENE-990525 N 0.000