CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GRMZM2G153594
(
Zea mays
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03859 (CG-1)
IPR005559
GRMZM2G153594
T163208_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.793
0.793
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.732
0.732
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.707
0.707
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G153594_P02
CG-1
9
92
EAQHRWLRPAEICEILKNYRNFRIAPEPPNRPPSGSLFLFDRKVLRYFRKDGHNWRKKNDQKTVKEAHERLKVSNFVYQYLLSN
Links
Other
CG-1
family TFs
Other
Zea mays
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Sb0012s010230
Sorghum bicolor
Sb0012s010230
I
0.890
GRMZM2G341747
Zea mays
GRMZM2G341747
I
0.890
Pavir.Ib02991
Panicum virgatum
Pavir.Ib02991
I
0.890
Pavir.Ia02749
Panicum virgatum
Pavir.Ia02749
I
0.890
OB03G16740
Oryza brachyantha
OB03G16740
I
0.854
Sb01g044480
Sorghum bicolor
Sb01g044480
I
0.854
LPERR03G05920
Leersia perrieri
LPERR03G05920
I
0.841
OBART03G06570
Oryza barthii
OBART03G06570
I
0.829
OB10G16130
Oryza brachyantha
OB10G16130
I
0.829
LPERR10G05550
Leersia perrieri
LPERR10G05550
I
0.829
Ciclev10029792m.g
Citrus clementina
Ciclev10029792m.g
I
0.818
OLONG_003971
Oryza longistaminata
OLONG_003971
I
0.817
ORUFI10G08490
Oryza rufipogon
ORUFI10G08490
I
0.817
mgf024932m
Mimulus guttatus
mgf024932m
I
0.817
Aquca_008_00132
Aquilegia coerulea
Aquca_008_00132
I
0.817
OS10G0375600
Oryza sativa
OS10G0375600
I
0.817
OBART10G08060
Oryza barthii
OBART10G08060
I
0.817
ORGLA10G0066800
Oryza glaberrima
ORGLA10G0066800
I
0.817
ONIVA10G07730
Oryza nivara
ONIVA10G07730
I
0.817
OGLUM10G07770
Oryza glumaepatula
OGLUM10G07770
I
0.817
GSMUA_AchrUn_randomG02100_001
Musa acuminata
GSMUA_AchrUn_randomG02100_001
I
0.817
GSMUA_Achr3G21310_001
Musa acuminata
GSMUA_Achr3G21310_001
I
0.817
GSMUA_Achr1G21540_001
Musa acuminata
GSMUA_Achr1G21540_001
I
0.817
GSMUA_AchrUn_randomG08930_001
Musa acuminata
GSMUA_AchrUn_randomG08930_001
I
0.805
scaffold_803130.1
Arabidopsis lyrata
scaffold_803130.1
I
0.793
Ca_05255
Cicer arietinum
Ca_05255
I
0.793
CMTA2
Arabidopsis thaliana
AT5G64220
D
0.793
Cagra.0248s0103
Capsella grandiflora
Cagra.0248s0103
I
0.793
Carubv10025787m.g
Capsella rubella
Carubv10025787m.g
I
0.793
chr4.CM0182.510.nc
Lotus japonicus
chr4.CM0182.510.nc
I
0.793
Bostr.0568s0382
Boechera stricta
Bostr.0568s0382
I
0.793
Gorai.013G061100
Gossypium raimondii
Gorai.013G061100
I
0.780
chr4.LjT13D08.100.nd
Lotus japonicus
chr4.LjT13D08.100.nd
I
0.780
Eucgr.H04783
Eucalyptus grandis
Eucgr.H04783
I
0.780
Lus10003405.g
Linum usitatissimum
Lus10003405.g
I
0.768
Si028797m.g
Setaria italica
Si028797m.g
I
0.768
Gorai.005G220600
Gossypium raimondii
Gorai.005G220600
I
0.768
Aquca_010_00201
Aquilegia coerulea
Aquca_010_00201
I
0.768
AMTR_s00038p00173360
Amborella trichopoda
AMTR_s00038p00173360
I
0.768
MLOC_63299
Hordeum vulgare
MLOC_63299
I
0.756
Sb02g039710
Sorghum bicolor
Sb02g039710
I
0.756
Traes_5BL_92902F993
Triticum aestivum
Traes_5BL_92902F993
I
0.756
Cla013051
Citrullus lanatus
Cla013051
I
0.744
ORUFI03G20520
Oryza rufipogon
ORUFI03G20520
I
0.732
OBART03G19880
Oryza barthii
OBART03G19880
I
0.732
GLYMA05G31190
Glycine max
GLYMA05G31190
I
0.732
BGIOSGA012779
Oryza indica
BGIOSGA012779
I
0.732
EICBP.B
Arabidopsis thaliana
AT5G09410
D
0.732
mgf015897m
Mimulus guttatus
mgf015897m
I
0.732
OGLUM03G20490
Oryza glumaepatula
OGLUM03G20490
I
0.732
mgf010601m
Mimulus guttatus
mgf010601m
I
0.732
OMERI03G17850
Oryza meridionalis
OMERI03G17850
I
0.732
ONIVA03G21570
Oryza nivara
ONIVA03G21570
I
0.732
evm.TU.supercontig_146.41
Carica papaya
evm.TU.supercontig_146.41
I
0.720
Bra038534
Brassica rapa
Bra038534
I
0.707
Bo4g149510
Brassica oleracea
Bo4g149510
I
0.707