GRMZM2G153594 (Zea mays)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 GRMZM2G153594 T163208_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.793 0.793
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD

HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.732 0.732
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN

NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.707 0.707
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GRMZM2G153594_P02 CG-1 9 92

Links

Other CG-1 family TFs
Other Zea mays TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I 0.768
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I 0.817
Aquca_010_00201 Aquilegia coerulea Aquca_010_00201 I 0.768
EICBP.B Arabidopsis thaliana AT5G09410 D 0.732
CMTA2 Arabidopsis thaliana AT5G64220 D 0.793
BGIOSGA012779 Oryza indica BGIOSGA012779 I 0.732
Bo4g149510 Brassica oleracea Bo4g149510 I 0.707
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.793
Bra038534 Brassica rapa Bra038534 I 0.707
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.793
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.793
Ca_05255 Cicer arietinum Ca_05255 I 0.793
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I 0.793
chr4.LjT13D08.100.nd Lotus japonicus chr4.LjT13D08.100.nd I 0.780
Ciclev10029792m.g Citrus clementina Ciclev10029792m.g I 0.818
Cla013051 Citrullus lanatus Cla013051 I 0.744
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I 0.780
evm.TU.supercontig_146.41 Carica papaya evm.TU.supercontig_146.41 I 0.720
GLYMA05G31190 Glycine max GLYMA05G31190 I 0.732
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I 0.768
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I 0.780
GRMZM2G341747 Zea mays GRMZM2G341747 I 0.890
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I 0.817
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I 0.817
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I 0.817
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I 0.805
LPERR03G05920 Leersia perrieri LPERR03G05920 I 0.841
LPERR10G05550 Leersia perrieri LPERR10G05550 I 0.829
Lus10003405.g Linum usitatissimum Lus10003405.g I 0.768
mgf010601m Mimulus guttatus mgf010601m I 0.732
mgf015897m Mimulus guttatus mgf015897m I 0.732
mgf024932m Mimulus guttatus mgf024932m I 0.817
MLOC_63299 Hordeum vulgare MLOC_63299 I 0.756
OB03G16740 Oryza brachyantha OB03G16740 I 0.854
OB10G16130 Oryza brachyantha OB10G16130 I 0.829
OBART03G06570 Oryza barthii OBART03G06570 I 0.829
OBART03G19880 Oryza barthii OBART03G19880 I 0.732
OBART10G08060 Oryza barthii OBART10G08060 I 0.817
OGLUM03G20490 Oryza glumaepatula OGLUM03G20490 I 0.732
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I 0.817
OLONG_003971 Oryza longistaminata OLONG_003971 I 0.817
OMERI03G17850 Oryza meridionalis OMERI03G17850 I 0.732
ONIVA03G21570 Oryza nivara ONIVA03G21570 I 0.732
ONIVA10G07730 Oryza nivara ONIVA10G07730 I 0.817
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I 0.817
ORUFI03G20520 Oryza rufipogon ORUFI03G20520 I 0.732
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I 0.817
OS10G0375600 Oryza sativa OS10G0375600 I 0.817
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I 0.890
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I 0.890
Sb0012s010230 Sorghum bicolor Sb0012s010230 I 0.890
Sb01g044480 Sorghum bicolor Sb01g044480 I 0.854
Sb02g039710 Sorghum bicolor Sb02g039710 I 0.756
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.793
Si028797m.g Setaria italica Si028797m.g I 0.768
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I 0.756