POPTR_0001s13700 (Populus trichocarpa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 POPTR_0001s13700 T163335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s13700.1 CG-1 14 128

Links

Other CG-1 family TFs
Other Populus trichocarpa TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.947
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.939
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N 0.904
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.895
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N 0.886
cassava6546.valid.m1 Manihot esculenta cassava6546.valid.m1 N 0.886
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.877
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.877
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.851
TCM_008731 Theobroma cacao TCM_008731 N 0.842
Ca_08511 Cicer arietinum Ca_08511 N 0.842
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.842
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.842
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.833
MDP0000262800 Malus domestica MDP0000262800 N 0.833
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.833
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.825
PK06349.1 Cannabis sativa PK06349.1 N 0.825
Pm007031 Prunus mume Pm007031 N 0.825
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N 0.816
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.816
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.816
GLYMA08G11080 Glycine max GLYMA08G11080 N 0.798
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N 0.798
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.789
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N 0.789
Ca_11361 Cicer arietinum Ca_11361 N 0.771
Bo6g099030 Brassica oleracea Bo6g099030 N 0.763
Lus10003119.g Linum usitatissimum Lus10003119.g N 0.763
Bra034007 Brassica rapa Bra034007 N 0.763
Bra004096 Brassica rapa Bra004096 N 0.754
Lus10011352.g Linum usitatissimum Lus10011352.g N 0.754
Bo2g055720 Brassica oleracea Bo2g055720 N 0.754
mgf025436m Mimulus guttatus mgf025436m N 0.746
Cla000701 Citrullus lanatus Cla000701 N 0.746
fgenesh1_pm.C_scaffold_2000778 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000778 N 0.746
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N 0.737
CMTA4 Arabidopsis thaliana AT1G67310 N 0.737
Carubv10022369m.g Capsella rubella Carubv10022369m.g N 0.728
Bo6g103720 Brassica oleracea Bo6g103720 N 0.728
MTR_3g085050 Medicago truncatula MTR_3g085050 N 0.728
Bra004217 Brassica rapa Bra004217 N 0.719
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.719
Ca_09562 Cicer arietinum Ca_09562 I 0.714
OS04G0388500 Oryza sativa OS04G0388500 N 0.711
OGLUM04G10170 Oryza glumaepatula OGLUM04G10170 N 0.711
OPUNC04G08570 Oryza punctata OPUNC04G08570 N 0.711
ORUFI04G11670 Oryza rufipogon ORUFI04G11670 N 0.711
BGIOSGA016274 Oryza indica BGIOSGA016274 N 0.711
ORGLA04G0075400 Oryza glaberrima ORGLA04G0075400 N 0.711
GLYMA18G00840 Glycine max GLYMA18G00840 N 0.711
OBART04G10490 Oryza barthii OBART04G10490 N 0.711
ORGLA02G0342600 Oryza glaberrima ORGLA02G0342600 N 0.711
Gorai.008G089900 Gossypium raimondii Gorai.008G089900 I 0.707
SELMODRAFT_18382 Selaginella moellendorffii SELMODRAFT_18382 I 0.704
SELMODRAFT_28388 Selaginella moellendorffii SELMODRAFT_28388 I 0.704
GLYMA11G36930 Glycine max GLYMA11G36930 N 0.702
Traes_4BL_A37F6FD08 Triticum aestivum Traes_4BL_A37F6FD08 I 0.702
OB04G17680 Oryza brachyantha OB04G17680 N 0.702
Si009249m.g Setaria italica Si009249m.g N 0.702
GSMUA_Achr8G09270_001 Musa acuminata GSMUA_Achr8G09270_001 N 0.700