POPTR_0010s15160 (Populus trichocarpa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 POPTR_0010s15160 T163340_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.904 0.904
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0010s15160.1 CG-1 31 145

Links

Other CG-1 family TFs
Other Populus trichocarpa TFs

59 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
HR4 Aedes aegypti AAEL005850 I 0.000
AALB009744 Anopheles albimanus AALB009744 I 0.000
AARA009589 Anopheles arabiensis AARA009589 I 0.000
AATE017109 Anopheles atroparvus AATE017109 I 0.000
ACUA005145 Anopheles culicifacies ACUA005145 I 0.000
ACYPI008092 Acyrthosiphon pisum ACYPI008092 I 0.000
ADAC000363 Anopheles darlingi ADAC000363 I 0.000
ADIR011708 Anopheles dirus ADIR011708 I 0.000
AEPI008247 Anopheles epiroticus AEPI008247 I 0.000
AFAF001412 Anopheles farauti AFAF001412 I 0.000
AFUN006529 Anopheles funestus AFUN006529 I 0.000
AGAP004693 Anopheles gambiae AGAP004693 I 0.000
AMEC001395 Anopheles melas AMEC001395 I 0.000
AMEM013714 Anopheles merus AMEM013714 I 0.000
AMIN007496 Anopheles minimus AMIN007496 I 0.000
ANCCAN_16811 Ancylostoma caninum ANCCAN_16811 I 0.000
AQUA001805 Anopheles quadriannulatus AQUA001805 I 0.000
ASIS014728 Anopheles sinensis ASIS014728 I 0.000
ASTEI10442 Anopheles stephensi ASTEI10442 I 0.000
BGIBMGA007888 Bombyx mori BGIBMGA007888 I 0.000
Bm9841 Brugia malayi Bm9841 I 0.000
BTMF_0001429801 Brugia timori BTMF_0001429801 I 0.000
CapteG167148 Capitella teleta CapteG167148 I 0.000
Cflo_04194--XP_394401.3_APIME Camponotus floridanus Cflo_04194--XP_394401.3_APIME I 0.000
CGI_10028547 Crassostrea gigas CGI_10028547 I 0.000
CLEC009113 Cimex lectularius CLEC009113 I 0.000
D918_01741 Trichuris suis D918_01741 I 0.000
DAPPUDRAFT_203579 Daphnia pulex DAPPUDRAFT_203579 I 0.000
DICVIV_04175 Dictyocaulus viviparus DICVIV_04175 I 0.000
EFV52797 Trichinella spiralis EFV52797 I 0.000
GF22191 Drosophila ananassae FBgn0099190 I 0.000
GG12896 Drosophila erecta FBgn0105169 I 0.000
GL15259 Drosophila persimilis FBgn0152863 I 0.000
GM19185 Drosophila sechellia FBgn0174087 I 0.000
GJ14872 Drosophila virilis FBgn0202076 I 0.000
GK25182 Drosophila willistoni FBgn0227141 I 0.000
GA22933 Drosophila pseudoobscura FBgn0244335 I 0.000
Hr4 Drosophila melanogaster FBgn0264562 D 0.000
GB47037 Apis mellifera GB47037 I 0.000
HCOI00086900 Haemonchus contortus HCOI00086900 I 0.000
HCOI00493700 Haemonchus contortus HCOI00493700 I 0.000
HPLM_0002138101 Haemonchus placei HPLM_0002138101 I 0.000
Hsal_01036--XP_394401.3_APIME Harpegnathos saltator Hsal_01036--XP_394401.3_APIME I 0.000
ISCW023325 Ixodes scapularis ISCW023325 I 0.000
KGM_09715 Danaus plexippus KGM_09715 I 0.000
L798_07819 Zootermopsis nevadensis L798_07819 I 0.000
L889_g14845 Steinernema feltiae L889_g14845 I 0.000
L893_g2513 Steinernema glaseri L893_g2513 I 0.000
L898_g9220 Steinernema monticolum L898_g9220 I 0.000
LCUP018530 Lucilia cuprina LCUP018530 I 0.000
LDEC010173 Leptinotarsa decemlineata LDEC010173 I 0.000
LLOJ003352 Lutzomyia longipalpis LLOJ003352 I 0.000
LOAG_09892 Loa loa LOAG_09892 I 0.000
MCINX005799 Melitaea cinxia MCINX005799 I 0.000
MDOA010017 Musca domestica MDOA010017 I 0.000
nLs.2.1.2.g05740 Litomosoides sigmodontis nLs.2.1.2.g05740 I 0.000
nOo.2.0.1.g11272 Onchocerca ochengi nOo.2.0.1.g11272 I 0.000
nRc.2.0.1.g44932 Romanomermis culicivorax nRc.2.0.1.g44932 I 0.000
NV14578 Nasonia vitripennis NV14578 I 0.000
Ocbimv22018322m.g Octopus bimaculoides Ocbimv22018322m.g I 0.000
PHUM195250 Pediculus humanus PHUM195250 I 0.000
RPRC012796 Rhodnius prolixus RPRC012796 I 0.000
SPU_018861 Strongylocentrotus purpuratus SPU_018861 I 0.000
TC000543 Tribolium castaneum TC000543 I 0.000
TCLT_0000522601 Thelazia callipaeda TCLT_0000522601 I 0.000
tetur07g00140 Tetranychus urticae tetur07g00140 I 0.000
TMUE_s0249000200 Trichuris muris TMUE_s0249000200 I 0.000
TTRE_0000267601 Trichuris trichiura TTRE_0000267601 I 0.000
WUBG_07301 Wuchereria bancrofti WUBG_07301 I 0.000