SELMODRAFT_18382 (Selaginella moellendorffii)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 SELMODRAFT_18382 T163359_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.817 0.817
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN

NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.803 0.803
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD

HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.789 0.789
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ09519 CG-1 1 73

Links

Other CG-1 family TFs
Other Selaginella moellendorffii TFs

80 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29889.m003372 Ricinus communis 29889.m003372 I 0.817
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I 0.831
Aquca_003_00380 Aquilegia coerulea Aquca_003_00380 I 0.803
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I 0.817
Aquca_010_00201 Aquilegia coerulea Aquca_010_00201 I 0.859
CMTA3 Arabidopsis thaliana AT2G22300 D 0.789
EICBP.B Arabidopsis thaliana AT5G09410 D 0.789
CMTA2 Arabidopsis thaliana AT5G64220 D 0.817
BGIOSGA012779 Oryza indica BGIOSGA012779 I 0.831
Bo4g149510 Brassica oleracea Bo4g149510 I 0.775
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.817
Bra038534 Brassica rapa Bra038534 I 0.789
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.817
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.817
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.746
Ca_05255 Cicer arietinum Ca_05255 I 0.845
Ca_09562 Cicer arietinum Ca_09562 I 0.714
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I 0.845
chr4.LjT13D08.100.nd Lotus japonicus chr4.LjT13D08.100.nd I 0.789
Cla004910 Citrullus lanatus Cla004910 N 0.775
Cla013051 Citrullus lanatus Cla013051 I 0.817
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.704
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I 0.803
gene16294-v1.0-hybrid Fragaria vesca gene16294-v1.0-hybrid N 0.704
GLYMA05G31190 Glycine max GLYMA05G31190 I 0.831
GLYMA11G36930 Glycine max GLYMA11G36930 N 0.761
GLYMA18G00840 Glycine max GLYMA18G00840 N 0.746
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I 0.845
Gorai.008G089900 Gossypium raimondii Gorai.008G089900 I 0.845
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I 0.859
GRMZM2G341747 Zea mays GRMZM2G341747 I 0.803
GRMZM2G431243 Zea mays GRMZM2G431243 I 0.702
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I 0.859
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I 0.831
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I 0.845
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I 0.873
LPERR03G05920 Leersia perrieri LPERR03G05920 I 0.831
LPERR10G05550 Leersia perrieri LPERR10G05550 I 0.817
Lus10003405.g Linum usitatissimum Lus10003405.g I 0.817
mgf010601m Mimulus guttatus mgf010601m I 0.831
mgf015897m Mimulus guttatus mgf015897m I 0.831
mgf024932m Mimulus guttatus mgf024932m I 0.817
MLOC_63299 Hordeum vulgare MLOC_63299 I 0.845
MTR_4g094215 Medicago truncatula MTR_4g094215 I 0.718
OB03G16740 Oryza brachyantha OB03G16740 I 0.831
OB10G16130 Oryza brachyantha OB10G16130 I 0.831
OBART03G06570 Oryza barthii OBART03G06570 I 0.732
OBART03G19880 Oryza barthii OBART03G19880 I 0.831
OBART10G08060 Oryza barthii OBART10G08060 I 0.831
OGLUM03G20490 Oryza glumaepatula OGLUM03G20490 I 0.831
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I 0.831
OLONG_003971 Oryza longistaminata OLONG_003971 I 0.831
OMERI03G17850 Oryza meridionalis OMERI03G17850 I 0.831
ONIVA03G21570 Oryza nivara ONIVA03G21570 I 0.831
ONIVA10G07730 Oryza nivara ONIVA10G07730 I 0.831
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I 0.831
ORUFI03G20520 Oryza rufipogon ORUFI03G20520 I 0.831
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I 0.831
OS10G0375600 Oryza sativa OS10G0375600 I 0.831
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I 0.803
Pavir.Ib00572 Panicum virgatum Pavir.Ib00572 I 0.817
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I 0.803
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.704
POPTR_0010s16290 Populus trichocarpa POPTR_0010s16290 I 0.789
PRUPE_ppa000612mg Prunus persica PRUPE_ppa000612mg I 0.859
Sb0012s010230 Sorghum bicolor Sb0012s010230 I 0.803
Sb01g044480 Sorghum bicolor Sb01g044480 I 0.831
Sb02g039710 Sorghum bicolor Sb02g039710 I 0.859
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.817
SELMODRAFT_28388 Selaginella moellendorffii SELMODRAFT_28388 I 1.000
SELMODRAFT_413101 Selaginella moellendorffii SELMODRAFT_413101 I 0.831
SELMODRAFT_441667 Selaginella moellendorffii SELMODRAFT_441667 I 0.831
Si028797m.g Setaria italica Si028797m.g I 0.845
Si034054m.g Setaria italica Si034054m.g I 0.831
Solyc04g056270.2 Solanum lycopersicum Solyc04g056270.2 I 0.817
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.704
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N 0.718
TCM_008731 Theobroma cacao TCM_008731 N 0.718
Traes_4BL_A37F6FD08 Triticum aestivum Traes_4BL_A37F6FD08 I 0.831
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I 0.775