TCM_021327 (Theobroma cacao)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 TCM_021327 T163391_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.904 0.904
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY06673 CG-1 31 145
EOY06674 CG-1 31 145

Links

Other CG-1 family TFs
Other Theobroma cacao TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
PTRK_0000720200 Parastrongyloides trichosuri PTRK_0000720200 N 0.000
SVE_1799500 Strongyloides venezuelensis SVE_1799500 N 0.000