Ca_02997 (Cicer arietinum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Ca_02997 T163431_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.904 0.904
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_02997 CG-1 3 117

Links

Other CG-1 family TFs
Other Cicer arietinum TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29904.m002943 Ricinus communis 29904.m002943 I 0.000
AMTR_s00061p00067260 Amborella trichopoda AMTR_s00061p00067260 N 0.000
AMTR_s00089p00097770 Amborella trichopoda AMTR_s00089p00097770 I 0.000
Aquca_034_00154 Aquilegia coerulea Aquca_034_00154 N 0.000
Bo5g004970 Brassica oleracea Bo5g004970 I 0.000
Bo8g004290 Brassica oleracea Bo8g004290 I 0.000
Bo8g115380 Brassica oleracea Bo8g115380 I 0.000
Bostr.25219s0485 Boechera stricta Bostr.25219s0485 I 0.000
Bra015358 Brassica rapa Bra015358 I 0.000
Bra030594 Brassica rapa Bra030594 I 0.000
Bra032491 Brassica rapa Bra032491 I 0.000
Cagra.1671s0107 Capsella grandiflora Cagra.1671s0107 I 0.000
Carubv10010835m.g Capsella rubella Carubv10010835m.g I 0.000
cassava27713.m1 Manihot esculenta cassava27713.m1 I 0.000
Ca_21617 Cicer arietinum Ca_21617 I 0.000
Ciclev10005091m.g Citrus clementina Ciclev10005091m.g I 0.000
Cucsa.193910 Cucumis sativus Cucsa.193910 I 0.000
Eucgr.H00052 Eucalyptus grandis Eucgr.H00052 I 0.000
evm.TU.supercontig_1068.1 Carica papaya evm.TU.supercontig_1068.1 I 0.000
fgenesh2_kg.1__427__AT1G04880.1 Arabidopsis lyrata fgenesh2_kg.1__427__AT1G04880.1 I 0.000
gene06664-v1.0-hybrid Fragaria vesca gene06664-v1.0-hybrid I 0.000
GLYMA10G44041 Glycine max GLYMA10G44041 I 0.000
GLYMA20G38761 Glycine max GLYMA20G38761 I 0.000
Gorai.005G130200 Gossypium raimondii Gorai.005G130200 I 0.000
Gorai.011G157600 Gossypium raimondii Gorai.011G157600 I 0.000
GSMUA_Achr6G21080_001 Musa acuminata GSMUA_Achr6G21080_001 I 0.000
GSMUA_Achr8G28470_001 Musa acuminata GSMUA_Achr8G28470_001 I 0.000
HMGB15 Arabidopsis thaliana AT1G04880 D 0.000
Lus10007127.g Linum usitatissimum Lus10007127.g I 0.000
Lus10016671.g Linum usitatissimum Lus10016671.g I 0.000
MDP0000307705 Malus domestica MDP0000307705 I 0.000
mgf005082m Mimulus guttatus mgf005082m N 0.000
MTR_1g116180 Medicago truncatula MTR_1g116180 I 0.000
MTR_7g005970 Medicago truncatula MTR_7g005970 I 0.000
orange1.1g046368m.g Citrus sinensis orange1.1g046368m.g I 0.000
PGSC0003DMG400031288 Solanum tuberosum PGSC0003DMG400031288 I 0.000
PK27727.1 Cannabis sativa PK27727.1 I 0.000
Pm009491 Prunus mume Pm009491 I 0.000
POPTR_0001s32240 Populus trichocarpa POPTR_0001s32240 I 0.000
PRUPE_ppa026976mg Prunus persica PRUPE_ppa026976mg I 0.000
SapurV1A.0058s0580 Salix purpurea SapurV1A.0058s0580 I 0.000
SapurV1A.1542s0040 Salix purpurea SapurV1A.1542s0040 I 0.000
SapurV1A.5889s0010 Salix purpurea SapurV1A.5889s0010 I 0.000
Solyc09g091960.2 Solanum lycopersicum Solyc09g091960.2 I 0.000
TCM_020322 Theobroma cacao TCM_020322 I 0.000
Thhalv10007631m.g Eutrema salsugineum Thhalv10007631m.g I 0.000
VIT_05s0029g00130 Vitis vinifera VIT_05s0029g00130 I 0.000