Ca_09562 (Cicer arietinum)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Ca_09562 T163434_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		0.857 0.857
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.814 0.814
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.814 0.814
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ca_09562 CG-1 1 71

Links

Other CG-1 family TFs
Other Cicer arietinum TFs

99 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
chr4.LjT13D08.100.nd Lotus japonicus chr4.LjT13D08.100.nd I 0.943
GLYMA05G31190 Glycine max GLYMA05G31190 I 0.929
Aquca_008_00132 Aquilegia coerulea Aquca_008_00132 I 0.914
Gorai.008G089900 Gossypium raimondii Gorai.008G089900 I 0.900
PRUPE_ppa000612mg Prunus persica PRUPE_ppa000612mg I 0.900
Eucgr.H04783 Eucalyptus grandis Eucgr.H04783 I 0.900
Solyc04g056270.2 Solanum lycopersicum Solyc04g056270.2 I 0.886
AMTR_s00038p00173360 Amborella trichopoda AMTR_s00038p00173360 I 0.886
Aquca_010_00201 Aquilegia coerulea Aquca_010_00201 I 0.871
SELMODRAFT_413101 Selaginella moellendorffii SELMODRAFT_413101 I 0.871
SELMODRAFT_441667 Selaginella moellendorffii SELMODRAFT_441667 I 0.871
OBART03G19880 Oryza barthii OBART03G19880 I 0.857
OBART10G08060 Oryza barthii OBART10G08060 I 0.857
ONIVA10G07730 Oryza nivara ONIVA10G07730 I 0.857
OB10G16130 Oryza brachyantha OB10G16130 I 0.857
ORUFI10G08490 Oryza rufipogon ORUFI10G08490 I 0.857
OGLUM03G20490 Oryza glumaepatula OGLUM03G20490 I 0.857
ORUFI03G20520 Oryza rufipogon ORUFI03G20520 I 0.857
OMERI03G17850 Oryza meridionalis OMERI03G17850 I 0.857
OLONG_003971 Oryza longistaminata OLONG_003971 I 0.857
OGLUM10G07770 Oryza glumaepatula OGLUM10G07770 I 0.857
OS10G0375600 Oryza sativa OS10G0375600 I 0.857
ONIVA03G21570 Oryza nivara ONIVA03G21570 I 0.857
CMTA3 Arabidopsis thaliana AT2G22300 D 0.857
Aquca_003_00380 Aquilegia coerulea Aquca_003_00380 I 0.857
Cla004910 Citrullus lanatus Cla004910 N 0.857
29889.m003372 Ricinus communis 29889.m003372 I 0.857
BGIOSGA012779 Oryza indica BGIOSGA012779 I 0.857
Si034054m.g Setaria italica Si034054m.g I 0.857
Bra038534 Brassica rapa Bra038534 I 0.857
Sb01g044480 Sorghum bicolor Sb01g044480 I 0.857
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I 0.857
ORGLA10G0066800 Oryza glaberrima ORGLA10G0066800 I 0.857
Pavir.Ib00572 Panicum virgatum Pavir.Ib00572 I 0.843
Ca_05255 Cicer arietinum Ca_05255 I 0.843
POPTR_0010s16290 Populus trichocarpa POPTR_0010s16290 I 0.843
GSMUA_AchrUn_randomG08930_001 Musa acuminata GSMUA_AchrUn_randomG08930_001 I 0.843
LPERR10G05550 Leersia perrieri LPERR10G05550 I 0.843
Bo4g149510 Brassica oleracea Bo4g149510 I 0.843
Cla013051 Citrullus lanatus Cla013051 I 0.829
Eucgr.I02632 Eucalyptus grandis Eucgr.I02632 I 0.829
GSMUA_Achr1G21540_001 Musa acuminata GSMUA_Achr1G21540_001 I 0.829
Si028797m.g Setaria italica Si028797m.g I 0.829
GLYMA08G19101 Glycine max GLYMA08G19101 I 0.829
Sb02g039710 Sorghum bicolor Sb02g039710 I 0.829
Traes_4BL_A37F6FD08 Triticum aestivum Traes_4BL_A37F6FD08 I 0.829
LPERR03G05920 Leersia perrieri LPERR03G05920 I 0.829
EICBP.B Arabidopsis thaliana AT5G09410 D 0.814
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I 0.814
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.814
CMTA2 Arabidopsis thaliana AT5G64220 D 0.814
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.814
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.814
mgf024932m Mimulus guttatus mgf024932m I 0.814
Gorai.013G061100 Gossypium raimondii Gorai.013G061100 I 0.814
GRMZM2G341747 Zea mays GRMZM2G341747 I 0.814
Pavir.Ib02991 Panicum virgatum Pavir.Ib02991 I 0.814
Sb0012s010230 Sorghum bicolor Sb0012s010230 I 0.814
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.814
Pavir.Ia02749 Panicum virgatum Pavir.Ia02749 I 0.814
OB03G16740 Oryza brachyantha OB03G16740 I 0.814
MLOC_63299 Hordeum vulgare MLOC_63299 I 0.814
MDP0000139862 Malus domestica MDP0000139862 I 0.800
TCM_021468 Theobroma cacao TCM_021468 I 0.800
GLYMA18G00840 Glycine max GLYMA18G00840 N 0.786
GLYMA11G36930 Glycine max GLYMA11G36930 N 0.786
TRIUR3_23040 Triticum urartu TRIUR3_23040 I 0.786
Traes_5BL_92902F993 Triticum aestivum Traes_5BL_92902F993 I 0.786
chr4.CM0182.510.nc Lotus japonicus chr4.CM0182.510.nc I 0.786
mgf010601m Mimulus guttatus mgf010601m I 0.771
mgf015897m Mimulus guttatus mgf015897m I 0.771
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.757
MTR_3g085050 Medicago truncatula MTR_3g085050 N 0.743
Ca_11361 Cicer arietinum Ca_11361 N 0.743
Lus10003405.g Linum usitatissimum Lus10003405.g I 0.743
TCM_008731 Theobroma cacao TCM_008731 N 0.743
gene16294-v1.0-hybrid Fragaria vesca gene16294-v1.0-hybrid N 0.743
GSMUA_Achr3G21310_001 Musa acuminata GSMUA_Achr3G21310_001 I 0.743
Pavir.Ib01843 Panicum virgatum Pavir.Ib01843 I 0.733
OPUNC04G08570 Oryza punctata OPUNC04G08570 N 0.729
GRMZM2G143205 Zea mays GRMZM2G143205 N 0.729
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.729
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N 0.729
SELMODRAFT_28388 Selaginella moellendorffii SELMODRAFT_28388 I 0.714
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.714
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.714
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.714
GRMZM2G431243 Zea mays GRMZM2G431243 I 0.714
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N 0.714
SELMODRAFT_18382 Selaginella moellendorffii SELMODRAFT_18382 I 0.714
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.714
CAMTA3 Vitis vinifera VIT_07s0141g00250 I 0.711
PK06349.1 Cannabis sativa PK06349.1 N 0.700
F775_11712 Aegilops tauschii F775_11712 N 0.700
ONIVA10G07200 Oryza nivara ONIVA10G07200 I 0.700
Traes_2DL_474B433DF Triticum aestivum Traes_2DL_474B433DF N 0.700
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.700
TRIUR3_26386 Triticum urartu TRIUR3_26386 N 0.700
Traes_2BL_A89BDB407 Triticum aestivum Traes_2BL_A89BDB407 N 0.700