Cla009415 (Citrullus lanatus)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Cla009415 T163438_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.912 0.912
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla009415 CG-1 35 149

Links

Other CG-1 family TFs
Other Citrullus lanatus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AT1G62085 Arabidopsis thaliana AT1G62085 N 0.000
Bostr.22157s0123 Boechera stricta Bostr.22157s0123 I 0.000
Bostr.22157s0138 Boechera stricta Bostr.22157s0138 N 0.000
Bostr.22157s0159 Boechera stricta Bostr.22157s0159 N 0.000
Bostr.22157s0164 Boechera stricta Bostr.22157s0164 N 0.000
Cagra.0043s0013 Capsella grandiflora Cagra.0043s0013 N 0.000
Cagra.0043s0023 Capsella grandiflora Cagra.0043s0023 N 0.000
Carubv10020262m.g Capsella rubella Carubv10020262m.g N 0.000
Carubv10020276m.g Capsella rubella Carubv10020276m.g N 0.000