Cla009415 (Citrullus lanatus)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Cla009415 T163438_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.912 0.912
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla009415 CG-1 35 149

Links

Other CG-1 family TFs
Other Citrullus lanatus TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
A_00576 Schistosoma haematobium A_00576 N 0.000
csin101218 Clonorchis sinensis csin101218 N 0.000
ECANG7_08406 Echinococcus canadensis ECANG7_08406 N 0.000
HmN_000119400 Hymenolepis microstoma HmN_000119400 N 0.000
TsM_000059300 Taenia solium TsM_000059300 N 0.000
TTAC_0000094501 Hydatigera taeniaeformis TTAC_0000094501 N 0.000