cassava6546.valid.m1 (Manihot esculenta)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 cassava6546.valid.m1 T163464_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava6546.valid.m1 CG-1 14 128

Links

Other CG-1 family TFs
Other Manihot esculenta TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GSMUA_AchrUn_randomG02100_001 Musa acuminata GSMUA_AchrUn_randomG02100_001 I 0.728
SELMODRAFT_441667 Selaginella moellendorffii SELMODRAFT_441667 I 0.711
SELMODRAFT_413101 Selaginella moellendorffii SELMODRAFT_413101 I 0.711
orange1.1g001365m.g Citrus sinensis orange1.1g001365m.g I 0.702
Ciclev10024764m.g Citrus clementina Ciclev10024764m.g I 0.702
SapurV1A.1172s0010 Salix purpurea SapurV1A.1172s0010 N 0.860
mgf025436m Mimulus guttatus mgf025436m N 0.728
Cucsa.349690 Cucumis sativus Cucsa.349690 N 0.842
cassava42936.valid.m1 Manihot esculenta cassava42936.valid.m1 N 0.895
Pm007031 Prunus mume Pm007031 N 0.877
Cla000701 Citrullus lanatus Cla000701 N 0.746
Ca_08511 Cicer arietinum Ca_08511 N 0.860
VIT_01s0010g03850 Vitis vinifera VIT_01s0010g03850 N 0.851
TRIUR3_26386 Triticum urartu TRIUR3_26386 N 0.737
Traes_2DL_474B433DF Triticum aestivum Traes_2DL_474B433DF N 0.737
Traes_2BL_A89BDB407 Triticum aestivum Traes_2BL_A89BDB407 N 0.737
Traes_2AL_773EA7A5A Triticum aestivum Traes_2AL_773EA7A5A N 0.728
PK06349.1 Cannabis sativa PK06349.1 N 0.851
PDK_20s1550381g002 Phoenix dactylifera PDK_20s1550381g002 N 0.711
TCM_008731 Theobroma cacao TCM_008731 N 0.860
Aquca_040_00102 Aquilegia coerulea Aquca_040_00102 N 0.798
Cagra.1125s0011 Capsella grandiflora Cagra.1125s0011 N 0.754
SapurV1A.0056s0050 Salix purpurea SapurV1A.0056s0050 N 0.877
Pavir.Gb01963 Panicum virgatum Pavir.Gb01963 N 0.754
Pavir.Ga01952 Panicum virgatum Pavir.Ga01952 N 0.763
orange1.1g044976m.g Citrus sinensis orange1.1g044976m.g N 0.886
Carubv10022369m.g Capsella rubella Carubv10022369m.g N 0.746
MDP0000262800 Malus domestica MDP0000262800 N 0.851
Lus10011352.g Linum usitatissimum Lus10011352.g N 0.754
Lus10003119.g Linum usitatissimum Lus10003119.g N 0.746
Gorai.009G332200 Gossypium raimondii Gorai.009G332200 N 0.877
evm.TU.supercontig_43.77 Carica papaya evm.TU.supercontig_43.77 N 0.807
Eucgr.H04623 Eucalyptus grandis Eucgr.H04623 N 0.842
Ciclev10030636m.g Citrus clementina Ciclev10030636m.g N 0.886
SapurV1A.1460s0040 Salix purpurea SapurV1A.1460s0040 N 0.868
Thhalv10018053m.g Eutrema salsugineum Thhalv10018053m.g N 0.772
Solyc12g035520.1 Solanum lycopersicum Solyc12g035520.1 N 0.772
Solyc05g015650.2 Solanum lycopersicum Solyc05g015650.2 N 0.816
Si009249m.g Setaria italica Si009249m.g N 0.772
GSMUA_Achr8G09270_001 Musa acuminata GSMUA_Achr8G09270_001 N 0.702
GRMZM2G143205 Zea mays GRMZM2G143205 N 0.763
GLYMA18G00840 Glycine max GLYMA18G00840 N 0.772
GLYMA11G36930 Glycine max GLYMA11G36930 N 0.772
GLYMA08G11080 Glycine max GLYMA08G11080 N 0.825
GLYMA05G28090 Glycine max GLYMA05G28090 N 0.868
fgenesh1_pm.C_scaffold_2000778 Arabidopsis lyrata fgenesh1_pm.C_scaffold_2000778 N 0.763
F775_11712 Aegilops tauschii F775_11712 N 0.737
BRADI5G08167 Brachypodium distachyon BRADI5G08167 N 0.728
Bra034007 Brassica rapa Bra034007 N 0.746
Bra004217 Brassica rapa Bra004217 N 0.737
Bra004096 Brassica rapa Bra004096 N 0.772
Bo6g103720 Brassica oleracea Bo6g103720 N 0.746
Bo6g099030 Brassica oleracea Bo6g099030 N 0.781
Bo2g055720 Brassica oleracea Bo2g055720 N 0.746
GSMUA_Achr9G01330_001 Musa acuminata GSMUA_Achr9G01330_001 N 0.763
CMTA4 Arabidopsis thaliana AT1G67310 N 0.754
Si000282m.g Setaria italica Si000282m.g N 0.711
PRUPE_ppa000516mg Prunus persica PRUPE_ppa000516mg N 0.877
POPTR_0003s16910 Populus trichocarpa POPTR_0003s16910 N 0.886
POPTR_0001s13700 Populus trichocarpa POPTR_0001s13700 N 0.886
OS04G0388500 Oryza sativa OS04G0388500 N 0.772
ORUFI04G11670 Oryza rufipogon ORUFI04G11670 N 0.772
ORGLA04G0075400 Oryza glaberrima ORGLA04G0075400 N 0.772
ORGLA02G0342600 Oryza glaberrima ORGLA02G0342600 N 0.772
OPUNC04G08570 Oryza punctata OPUNC04G08570 N 0.772
OGLUM04G10170 Oryza glumaepatula OGLUM04G10170 N 0.772
OBART04G10490 Oryza barthii OBART04G10490 N 0.772
OB04G17680 Oryza brachyantha OB04G17680 N 0.763
MTR_8g080800 Medicago truncatula MTR_8g080800 N 0.851
MTR_3g085050 Medicago truncatula MTR_3g085050 N 0.781
LPERR04G07320 Leersia perrieri LPERR04G07320 N 0.754
BGIOSGA016274 Oryza indica BGIOSGA016274 N 0.772