Cagra.1365s0113 (Capsella grandiflora)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Cagra.1365s0113 T163499_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.956 0.956
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.939 0.939
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1365s0113.1.p CG-1 23 137

Links

Other CG-1 family TFs
Other Capsella grandiflora TFs

Invalid Input OrderBy

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action