Ciclev10004273m.g (Citrus clementina)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Ciclev10004273m.g T163509_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.895 0.895
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10004273m CG-1 27 141

Links

Other CG-1 family TFs
Other Citrus clementina TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA031227 Oryza indica BGIOSGA031227 N 0.000
Bra012832 Brassica rapa Bra012832 N 0.000
Ca_10726 Cicer arietinum Ca_10726 N 0.000
Cla010647 Citrullus lanatus Cla010647 N 0.000
CLEC004367 Cimex lectularius CLEC004367 N 0.000
CRE07740 Caenorhabditis remanei CRE07740 N 0.000
D917_04157 Trichinella nativa D917_04157 N 0.000
fgenesh1_pg.C_scaffold_10000369 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_10000369 N 0.000
GLYMA16G22060 Glycine max GLYMA16G22060 I 0.000
Hba_11463 Heterorhabditis bacteriophora Hba_11463 N 0.000
L893_g28673 Steinernema glaseri L893_g28673 N 0.000
Lus10013219.g Linum usitatissimum Lus10013219.g N 0.000
Lus10016695.g Linum usitatissimum Lus10016695.g N 0.000
Lus10027787.g Linum usitatissimum Lus10027787.g N 0.000
Lus10035991.g Linum usitatissimum Lus10035991.g N 0.000
OBART09G18880 Oryza barthii OBART09G18880 N 0.000
OFLC_0000670801 Onchocerca flexuosa OFLC_0000670801 N 0.000
OGLUM09G19410 Oryza glumaepatula OGLUM09G19410 N 0.000
OLONG_009629 Oryza longistaminata OLONG_009629 N 0.000
OPUNC09G17310 Oryza punctata OPUNC09G17310 N 0.000
PEQ_0000006801 Parascaris equorum PEQ_0000006801 N 0.000
PGSC0003DMG400001413 Solanum tuberosum PGSC0003DMG400001413 N 0.000