Gorai.011G204700 (Gossypium raimondii)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Gorai.011G204700 T163541_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.763 0.763
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.763 0.763
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.011G204700.1 CG-1 21 135
Gorai.011G204700.2 CG-1 21 135
Gorai.011G204700.3 CG-1 21 135
Gorai.011G204700.4 CG-1 21 135
Gorai.011G204700.5 CG-1 21 135
Gorai.011G204700.6 CG-1 21 135

Links

Other CG-1 family TFs
Other Gossypium raimondii TFs

Invalid Input OrderBy

165 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action