MDP0000233860 (Malus domestica)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 MDP0000233860 T163558_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CAMTA5
M06827_2.00
Arabidopsis thaliana
NVGYGTNNDHNVCGYGTN

NACRCGBNDHNNACRCBN
Dap-seq
OMalley et al.(2016)
CAMTA5_col_a
0.930 0.930
Q2WEL1_ORYSA
M10406_2.00
Oryza sativa Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$CBT_01
0.746 0.746
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000233860 CG-1 27 141

Links

Other CG-1 family TFs
Other Malus domestica TFs

75 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SapurV1A.0288s0160 Salix purpurea SapurV1A.0288s0160 N 0.000
TRAES3BF035900190CFD_g Triticum aestivum TRAES3BF035900190CFD_g N 0.000
TRAES3BF035900140CFD_g Triticum aestivum TRAES3BF035900140CFD_g N 0.000
TRAES3BF035900070CFD_g Triticum aestivum TRAES3BF035900070CFD_g N 0.000
Traes_3AL_CF608F443 Triticum aestivum Traes_3AL_CF608F443 N 0.000
Traes_3AL_970EF6E45 Triticum aestivum Traes_3AL_970EF6E45 N 0.000
Solyc10g085800.1 Solanum lycopersicum Solyc10g085800.1 N 0.000
Si004809m.g Setaria italica Si004809m.g N 0.000
Si004634m.g Setaria italica Si004634m.g N 0.000
Si004357m.g Setaria italica Si004357m.g N 0.000
Sb08g005380 Sorghum bicolor Sb08g005380 N 0.000
Sb07g024020 Sorghum bicolor Sb07g024020 N 0.000
POPTR_0009s00830 Populus trichocarpa POPTR_0009s00830 N 0.000
POPTR_0001s21990 Populus trichocarpa POPTR_0001s21990 N 0.000
PGSC0003DMG400008598 Solanum tuberosum PGSC0003DMG400008598 N 0.000
OS08G0560300 Oryza sativa OS08G0560300 N 0.000
Traes_3DL_96F825D26 Triticum aestivum Traes_3DL_96F825D26 N 0.000
Traes_7AS_9EA289C71 Triticum aestivum Traes_7AS_9EA289C71 N 0.000
Pavir.J13246 Panicum virgatum Pavir.J13246 N 0.000
Pavir.Fb02226 Panicum virgatum Pavir.Fb02226 N 0.000
Pavir.Fa00017 Panicum virgatum Pavir.Fa00017 N 0.000
Pavir.Eb02108 Panicum virgatum Pavir.Eb02108 N 0.000
Pavir.Eb01352 Panicum virgatum Pavir.Eb01352 N 0.000
Pavir.Ea01651 Panicum virgatum Pavir.Ea01651 N 0.000
orange1.1g028583m.g Citrus sinensis orange1.1g028583m.g N 0.000
Gorai.006G159900 Gossypium raimondii Gorai.006G159900 N 0.000
gene00954-v1.0-hybrid Fragaria vesca gene00954-v1.0-hybrid N 0.000
Cucsa.378840 Cucumis sativus Cucsa.378840 N 0.000
Ca_19047 Cicer arietinum Ca_19047 N 0.000
TRIUR3_34039 Triticum urartu TRIUR3_34039 N 0.000
TRIUR3_27842 Triticum urartu TRIUR3_27842 N 0.000
TRIUR3_09966 Triticum urartu TRIUR3_09966 N 0.000
Traes_7DS_620E0D488 Triticum aestivum Traes_7DS_620E0D488 N 0.000
OS01G0518000 Oryza sativa OS01G0518000 N 0.000
OS01G0517800 Oryza sativa OS01G0517800 N 0.000
ORUFI08G26100 Oryza rufipogon ORUFI08G26100 N 0.000
OB08G30470 Oryza brachyantha OB08G30470 N 0.000
OB01G27340 Oryza brachyantha OB01G27340 N 0.000
MLOC_26846 Hordeum vulgare MLOC_26846 N 0.000
MLOC_23439 Hordeum vulgare MLOC_23439 N 0.000
LPERR08G20370 Leersia perrieri LPERR08G20370 N 0.000
LPERR01G15600 Leersia perrieri LPERR01G15600 N 0.000
GSMUA_AchrUn_randomG07560_001 Musa acuminata GSMUA_AchrUn_randomG07560_001 N 0.000
GSMUA_Achr7G04460_001 Musa acuminata GSMUA_Achr7G04460_001 N 0.000
GRMZM2G171934 Zea mays GRMZM2G171934 N 0.000
GRMZM2G006585 Zea mays GRMZM2G006585 N 0.000
F775_30314 Aegilops tauschii F775_30314 N 0.000
F775_22386 Aegilops tauschii F775_22386 N 0.000
BRADI3G43000 Brachypodium distachyon BRADI3G43000 N 0.000
BGIOSGA026486 Oryza indica BGIOSGA026486 N 0.000
BGIOSGA001528 Oryza indica BGIOSGA001528 N 0.000
OBART01G17820 Oryza barthii OBART01G17820 N 0.000
OBART01G17850 Oryza barthii OBART01G17850 N 0.000
ORGLA11G0204800 Oryza glaberrima ORGLA11G0204800 N 0.000
ORGLA08G0190300 Oryza glaberrima ORGLA08G0190300 N 0.000
ORGLA01G0145800 Oryza glaberrima ORGLA01G0145800 N 0.000
OPUNC08G21610 Oryza punctata OPUNC08G21610 N 0.000
OPUNC01G18360 Oryza punctata OPUNC01G18360 N 0.000
OPUNC01G18340 Oryza punctata OPUNC01G18340 N 0.000
ONIVA08G26670 Oryza nivara ONIVA08G26670 N 0.000
OMERI08G18450 Oryza meridionalis OMERI08G18450 N 0.000
OMERI01G16670 Oryza meridionalis OMERI01G16670 N 0.000
OMERI01G16650 Oryza meridionalis OMERI01G16650 N 0.000
OLONG_020563 Oryza longistaminata OLONG_020563 N 0.000
OGLUM08G25080 Oryza glumaepatula OGLUM08G25080 N 0.000
OGLUM01G21100 Oryza glumaepatula OGLUM01G21100 N 0.000
OGLUM01G21080 Oryza glumaepatula OGLUM01G21080 N 0.000
OBART08G23610 Oryza barthii OBART08G23610 N 0.000
BGIOSGA001527 Oryza indica BGIOSGA001527 N 0.000