MDP0000290409 (Malus domestica)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 MDP0000290409 T163563_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.842 0.842
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN

NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.816 0.816
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD

HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.798 0.798
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000290409 CG-1 66 180

Links

Other CG-1 family TFs
Other Malus domestica TFs

176 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AGABI2DRAFT_121240 Agaricus bisporus AGABI2DRAFT_121240 N 0.000
V565_169990 Rhizoctonia solani V565_169990 N 0.000
SCLCIDRAFT_1222291 Scleroderma citrinum SCLCIDRAFT_1222291 N 0.000
SCHCODRAFT_257455 Schizophyllum commune SCHCODRAFT_257455 N 0.000
PAXRUDRAFT_121304 Paxillus rubicundulus PAXRUDRAFT_121304 N 0.000
PAXINDRAFT_103325 Paxillus involutus PAXINDRAFT_103325 N 0.000
Moror_14166 Moniliophthora roreri Moror_14166 N 0.000
K443DRAFT_673733 Laccaria amethystina K443DRAFT_673733 N 0.000
K443DRAFT_3307 Laccaria amethystina K443DRAFT_3307 N 0.000
GALMADRAFT_267440 Galerina marginata GALMADRAFT_267440 N 0.000
FIBRA_07863 Fibroporia radiculosa FIBRA_07863 N 0.000
CERSUDRAFT_114929 Ceriporiopsis subvermispora CERSUDRAFT_114929 N 0.000
CC1G_06938 Coprinopsis cinerea CC1G_06938 N 0.000
EuGene8000317 Heterobasidion annosum EuGene8000317 N 0.000