MDP0000293674 (Malus domestica)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 MDP0000293674 T163564_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT

ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000293674 CG-1 611 650

Links

Other CG-1 family TFs
Other Malus domestica TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Pm002007 Prunus mume Pm002007 I 0.775
TCM_007482 Theobroma cacao TCM_007482 I 0.725
Gorai.008G089900 Gossypium raimondii Gorai.008G089900 I 0.725
MDP0000290409 Malus domestica MDP0000290409 I 0.725
Gorai.005G220600 Gossypium raimondii Gorai.005G220600 I 0.700
MDP0000139862 Malus domestica MDP0000139862 I 0.700
Thhalv10003564m.g Eutrema salsugineum Thhalv10003564m.g I 0.700
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.700
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.700
Bo9g018010 Brassica oleracea Bo9g018010 I 0.700
Bra037769 Brassica rapa Bra037769 I 0.700
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.700
CMTA2 Arabidopsis thaliana AT5G64220 D 0.700
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.700