CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ib00572
(
Panicum virgatum
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03859 (CG-1)
IPR005559
Pavir.Ib00572
T163581_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.714
0.714
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ib00572.1.p
CG-1
30
142
VLRILLSRKFSRFYLQKGLPMLSFIVPSETKMVFAFLFDRKVLRYFRKDGHNWRKKRDGKTVKEAHERLKSGSIDVLHCYYAHGEENENFQRRSYWMLEEDFMHIVLVHYLEV
Links
Other
CG-1
family TFs
Other
Panicum virgatum
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy